Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC28A2O43868 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC28A2O43868 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC28A2O43868 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC28A2O43868 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SLC28A2O43868 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SLC28A2O43868 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC28A2O43868 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC28A2O43868 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SLC28A2O43868 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC28A2O43868 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SLC28A2O43868 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC28A2O43868 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC28A2O43868 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC28A2O43868 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC28A2O43868 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SLC28A2O43868 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC28A2O43868 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC28A2O43868 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.13■□□□□ 0.65
SLC28A2O43868 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SLC28A2O43868 PRKY-204ENST00000533551 1019 ntBASIC19.13■□□□□ 0.65
SLC28A2O43868 AC233263.1-201ENST00000578059 224 ntBASIC19.13■□□□□ 0.65
SLC28A2O43868 AC233702.5-201ENST00000584107 538 ntBASIC19.13■□□□□ 0.65
SLC28A2O43868 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SLC28A2O43868 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC28A2O43868 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC28A2O43868 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SLC28A2O43868 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC28A2O43868 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC28A2O43868 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC28A2O43868 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC28A2O43868 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC28A2O43868 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC28A2O43868 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC28A2O43868 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC28A2O43868 AL391422.3-201ENST00000603791 2761 ntBASIC19.13■□□□□ 0.65
SLC28A2O43868 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC28A2O43868 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC28A2O43868 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC28A2O43868 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC28A2O43868 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SLC28A2O43868 RPS2P55-201ENST00000397318 883 ntBASIC19.12■□□□□ 0.65
SLC28A2O43868 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC28A2O43868 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC28A2O43868 AC107956.1-201ENST00000494359 873 ntBASIC19.12■□□□□ 0.65
SLC28A2O43868 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC28A2O43868 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.12■□□□□ 0.65
SLC28A2O43868 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC28A2O43868 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
SLC28A2O43868 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC28A2O43868 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SLC28A2O43868 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC28A2O43868 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC28A2O43868 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC28A2O43868 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
SLC28A2O43868 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC28A2O43868 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC28A2O43868 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC28A2O43868 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC28A2O43868 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC28A2O43868 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC28A2O43868 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SLC28A2O43868 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SLC28A2O43868 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC28A2O43868 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC28A2O43868 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
SLC28A2O43868 PNMA6B-201ENST00000538162 1200 ntBASIC19.11■□□□□ 0.65
SLC28A2O43868 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC28A2O43868 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC28A2O43868 CD177P1-201ENST00000606252 935 ntBASIC19.11■□□□□ 0.65
SLC28A2O43868 AC069544.1-201ENST00000609399 999 ntBASIC19.11■□□□□ 0.65
SLC28A2O43868 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC28A2O43868 AC097493.4-201ENST00000641197 219 ntBASIC19.11■□□□□ 0.65
SLC28A2O43868 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC28A2O43868 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC28A2O43868 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC28A2O43868 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC28A2O43868 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC28A2O43868 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC28A2O43868 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SLC28A2O43868 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC28A2O43868 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC28A2O43868 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC28A2O43868 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC28A2O43868 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC28A2O43868 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SLC28A2O43868 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.1■□□□□ 0.65
SLC28A2O43868 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC28A2O43868 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC28A2O43868 AIRN-201ENST00000601203 4374 ntBASIC19.1■□□□□ 0.65
SLC28A2O43868 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC28A2O43868 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC28A2O43868 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.1■□□□□ 0.65
SLC28A2O43868 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC28A2O43868 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.1■□□□□ 0.65
SLC28A2O43868 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.1■□□□□ 0.65
SLC28A2O43868 MIR4785-201ENST00000585005 73 ntBASIC19.1■□□□□ 0.65
SLC28A2O43868 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SLC28A2O43868 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SLC28A2O43868 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms