Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLOCKO15516 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
CLOCKO15516 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLOCKO15516 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLOCKO15516 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.85■□□□□ 0.61
CLOCKO15516 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLOCKO15516 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLOCKO15516 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.85■□□□□ 0.61
CLOCKO15516 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CLOCKO15516 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLOCKO15516 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLOCKO15516 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.85■□□□□ 0.61
CLOCKO15516 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLOCKO15516 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLOCKO15516 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLOCKO15516 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLOCKO15516 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLOCKO15516 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLOCKO15516 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLOCKO15516 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLOCKO15516 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.84■□□□□ 0.61
CLOCKO15516 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.84■□□□□ 0.61
CLOCKO15516 TPRG1LP1-201ENST00000598702 760 ntBASIC18.84■□□□□ 0.61
CLOCKO15516 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLOCKO15516 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLOCKO15516 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.84■□□□□ 0.61
CLOCKO15516 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CLOCKO15516 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLOCKO15516 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLOCKO15516 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLOCKO15516 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.83■□□□□ 0.61
CLOCKO15516 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
CLOCKO15516 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLOCKO15516 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLOCKO15516 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLOCKO15516 NEFHP1-201ENST00000412845 2629 ntBASIC18.83■□□□□ 0.61
CLOCKO15516 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLOCKO15516 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CLOCKO15516 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLOCKO15516 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLOCKO15516 AC090192.1-201ENST00000517740 490 ntBASIC18.83■□□□□ 0.6
CLOCKO15516 RARRES2P11-201ENST00000635158 484 ntBASIC18.83■□□□□ 0.6
CLOCKO15516 LETM1P2-201ENST00000597330 2178 ntBASIC18.83■□□□□ 0.6
CLOCKO15516 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLOCKO15516 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLOCKO15516 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLOCKO15516 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLOCKO15516 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLOCKO15516 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.83■□□□□ 0.6
CLOCKO15516 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.83■□□□□ 0.6
CLOCKO15516 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLOCKO15516 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CLOCKO15516 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.82■□□□□ 0.6
CLOCKO15516 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLOCKO15516 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
CLOCKO15516 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.82■□□□□ 0.6
CLOCKO15516 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLOCKO15516 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.82■□□□□ 0.6
CLOCKO15516 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CLOCKO15516 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLOCKO15516 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLOCKO15516 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
CLOCKO15516 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
CLOCKO15516 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.82■□□□□ 0.6
CLOCKO15516 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.82■□□□□ 0.6
CLOCKO15516 AC092437.1-201ENST00000624794 1048 ntBASIC18.82■□□□□ 0.6
CLOCKO15516 TREX1-205ENST00000625293 1783 ntBASIC18.82■□□□□ 0.6
CLOCKO15516 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.82■□□□□ 0.6
CLOCKO15516 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.82■□□□□ 0.6
CLOCKO15516 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLOCKO15516 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLOCKO15516 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLOCKO15516 AC020763.4-201ENST00000623414 4170 ntBASIC18.82■□□□□ 0.6
CLOCKO15516 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLOCKO15516 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.81■□□□□ 0.6
CLOCKO15516 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLOCKO15516 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLOCKO15516 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CLOCKO15516 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.81■□□□□ 0.6
CLOCKO15516 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLOCKO15516 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.81■□□□□ 0.6
CLOCKO15516 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLOCKO15516 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLOCKO15516 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.81■□□□□ 0.6
CLOCKO15516 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLOCKO15516 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CLOCKO15516 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CLOCKO15516 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLOCKO15516 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLOCKO15516 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLOCKO15516 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLOCKO15516 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLOCKO15516 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLOCKO15516 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLOCKO15516 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLOCKO15516 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.8■□□□□ 0.6
CLOCKO15516 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLOCKO15516 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CLOCKO15516 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLOCKO15516 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms