Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA1O15239 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA1O15239 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA1O15239 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA1O15239 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
NDUFA1O15239 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA1O15239 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA1O15239 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
NDUFA1O15239 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA1O15239 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA1O15239 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NDUFA1O15239 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA1O15239 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.59□□□□□ -0.23
NDUFA1O15239 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA1O15239 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA1O15239 MIR2861-201ENST00000636310 90 ntBASIC13.59□□□□□ -0.23
NDUFA1O15239 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA1O15239 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
NDUFA1O15239 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC13.59□□□□□ -0.23
NDUFA1O15239 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA1O15239 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
NDUFA1O15239 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
NDUFA1O15239 AC026471.1-201ENST00000564629 3026 ntBASIC13.59□□□□□ -0.23
NDUFA1O15239 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA1O15239 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.59□□□□□ -0.23
NDUFA1O15239 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.59□□□□□ -0.23
NDUFA1O15239 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
NDUFA1O15239 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA1O15239 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
NDUFA1O15239 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA1O15239 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
NDUFA1O15239 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.59□□□□□ -0.23
NDUFA1O15239 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
NDUFA1O15239 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NDUFA1O15239 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
NDUFA1O15239 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
NDUFA1O15239 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
NDUFA1O15239 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC13.58□□□□□ -0.23
NDUFA1O15239 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
NDUFA1O15239 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
NDUFA1O15239 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC13.58□□□□□ -0.24
NDUFA1O15239 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA1O15239 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.58□□□□□ -0.24
NDUFA1O15239 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA1O15239 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA1O15239 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
NDUFA1O15239 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA1O15239 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA1O15239 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA1O15239 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC13.58□□□□□ -0.24
NDUFA1O15239 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NDUFA1O15239 AL031432.3-201ENST00000607698 485 ntBASIC13.58□□□□□ -0.24
NDUFA1O15239 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC13.58□□□□□ -0.24
NDUFA1O15239 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA1O15239 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
NDUFA1O15239 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.58□□□□□ -0.24
NDUFA1O15239 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA1O15239 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA1O15239 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA1O15239 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA1O15239 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA1O15239 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA1O15239 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA1O15239 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA1O15239 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA1O15239 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
NDUFA1O15239 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA1O15239 AL691432.2-201ENST00000607222 2038 ntBASIC13.57□□□□□ -0.24
NDUFA1O15239 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NDUFA1O15239 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.57□□□□□ -0.24
NDUFA1O15239 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NDUFA1O15239 KRT16P2-201ENST00000414673 1423 ntBASIC13.57□□□□□ -0.24
NDUFA1O15239 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NDUFA1O15239 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NDUFA1O15239 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NDUFA1O15239 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NDUFA1O15239 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC13.57□□□□□ -0.24
NDUFA1O15239 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NDUFA1O15239 NEFHP1-201ENST00000412845 2629 ntBASIC13.57□□□□□ -0.24
NDUFA1O15239 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NDUFA1O15239 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC13.57□□□□□ -0.24
NDUFA1O15239 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
NDUFA1O15239 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC13.57□□□□□ -0.24
NDUFA1O15239 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NDUFA1O15239 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NDUFA1O15239 SUDS3P1-201ENST00000505831 966 ntBASIC13.57□□□□□ -0.24
NDUFA1O15239 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC13.57□□□□□ -0.24
NDUFA1O15239 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
NDUFA1O15239 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NDUFA1O15239 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NDUFA1O15239 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NDUFA1O15239 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NDUFA1O15239 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
NDUFA1O15239 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NDUFA1O15239 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
NDUFA1O15239 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NDUFA1O15239 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC13.57□□□□□ -0.24
NDUFA1O15239 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NDUFA1O15239 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
NDUFA1O15239 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms