Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC32.55■■■□□ 2.8
CHD1O14646 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC32.55■■■□□ 2.8
CHD1O14646 PRELID1P1-202ENST00000567272 903 ntBASIC32.55■■■□□ 2.8
CHD1O14646 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC32.55■■■□□ 2.8
CHD1O14646 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
CHD1O14646 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
CHD1O14646 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
CHD1O14646 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CHD1O14646 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CHD1O14646 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CHD1O14646 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CHD1O14646 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC32.54■■■□□ 2.8
CHD1O14646 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC32.54■■■□□ 2.8
CHD1O14646 SPDYE13P-201ENST00000445314 798 ntBASIC32.54■■■□□ 2.8
CHD1O14646 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
CHD1O14646 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CHD1O14646 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC32.54■■■□□ 2.8
CHD1O14646 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC32.54■■■□□ 2.8
CHD1O14646 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CHD1O14646 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC32.54■■■□□ 2.8
CHD1O14646 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CHD1O14646 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CHD1O14646 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CHD1O14646 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC32.54■■■□□ 2.8
CHD1O14646 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC32.54■■■□□ 2.8
CHD1O14646 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CHD1O14646 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CHD1O14646 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CHD1O14646 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CHD1O14646 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC32.53■■■□□ 2.8
CHD1O14646 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CHD1O14646 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CHD1O14646 IFNL4P1-201ENST00000607083 540 ntBASIC32.53■■■□□ 2.8
CHD1O14646 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CHD1O14646 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CHD1O14646 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CHD1O14646 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CHD1O14646 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC32.52■■■□□ 2.8
CHD1O14646 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CHD1O14646 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC32.52■■■□□ 2.8
CHD1O14646 BCL10-202ENST00000620248 774 ntTSL 5 BASIC32.52■■■□□ 2.8
CHD1O14646 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CHD1O14646 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
CHD1O14646 AC004870.1-201ENST00000315132 882 ntBASIC32.51■■■□□ 2.8
CHD1O14646 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
CHD1O14646 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
CHD1O14646 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC32.51■■■□□ 2.8
CHD1O14646 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.8
CHD1O14646 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC32.51■■■□□ 2.8
CHD1O14646 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC32.51■■■□□ 2.79
CHD1O14646 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC32.51■■■□□ 2.79
CHD1O14646 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
CHD1O14646 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC32.51■■■□□ 2.79
CHD1O14646 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC32.51■■■□□ 2.79
CHD1O14646 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
CHD1O14646 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC32.51■■■□□ 2.79
CHD1O14646 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
CHD1O14646 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
CHD1O14646 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC32.5■■■□□ 2.79
CHD1O14646 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CHD1O14646 AL671883.3-201ENST00000603274 991 ntBASIC32.5■■■□□ 2.79
CHD1O14646 DFFB-212ENST00000625756 649 ntTSL 5 BASIC32.5■■■□□ 2.79
CHD1O14646 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CHD1O14646 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CHD1O14646 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CHD1O14646 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC32.49■■■□□ 2.79
CHD1O14646 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CHD1O14646 AL023803.3-201ENST00000615559 522 ntBASIC32.49■■■□□ 2.79
CHD1O14646 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
CHD1O14646 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CHD1O14646 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CHD1O14646 AC004951.3-201ENST00000418645 1148 ntBASIC32.48■■■□□ 2.79
CHD1O14646 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC32.48■■■□□ 2.79
CHD1O14646 SKP2-204ENST00000508514 821 ntTSL 3 BASIC32.48■■■□□ 2.79
CHD1O14646 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC32.48■■■□□ 2.79
CHD1O14646 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC32.48■■■□□ 2.79
CHD1O14646 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC32.48■■■□□ 2.79
CHD1O14646 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CHD1O14646 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
CHD1O14646 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC32.48■■■□□ 2.79
CHD1O14646 HYMAI.1-201ENST00000620949 238 ntBASIC32.48■■■□□ 2.79
CHD1O14646 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC32.48■■■□□ 2.79
CHD1O14646 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC32.48■■■□□ 2.79
CHD1O14646 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC32.47■■■□□ 2.79
CHD1O14646 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
CHD1O14646 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC32.47■■■□□ 2.79
CHD1O14646 AP006587.1-201ENST00000534129 1502 ntBASIC32.47■■■□□ 2.79
CHD1O14646 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CHD1O14646 PRSS44-201ENST00000515154 1146 ntBASIC32.47■■■□□ 2.79
CHD1O14646 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC32.47■■■□□ 2.79
CHD1O14646 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CHD1O14646 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CHD1O14646 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CHD1O14646 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC32.46■■■□□ 2.79
CHD1O14646 PTPA-216ENST00000432651 857 ntTSL 2 BASIC32.46■■■□□ 2.79
CHD1O14646 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC32.46■■■□□ 2.79
CHD1O14646 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CHD1O14646 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC32.46■■■□□ 2.79
CHD1O14646 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC32.46■■■□□ 2.79
CHD1O14646 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms