Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
CHL1O00533 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHL1O00533 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CHL1O00533 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHL1O00533 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHL1O00533 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
CHL1O00533 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC25.67■■□□□ 1.7
CHL1O00533 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHL1O00533 KRT16P5-201ENST00000455284 522 ntBASIC25.67■■□□□ 1.7
CHL1O00533 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CHL1O00533 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHL1O00533 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CHL1O00533 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC25.67■■□□□ 1.7
CHL1O00533 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC25.67■■□□□ 1.7
CHL1O00533 AL391422.3-201ENST00000603791 2761 ntBASIC25.67■■□□□ 1.7
CHL1O00533 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHL1O00533 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHL1O00533 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHL1O00533 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC25.66■■□□□ 1.7
CHL1O00533 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHL1O00533 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC25.66■■□□□ 1.7
CHL1O00533 AL691432.2-201ENST00000607222 2038 ntBASIC25.66■■□□□ 1.7
CHL1O00533 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHL1O00533 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHL1O00533 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CHL1O00533 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHL1O00533 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHL1O00533 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC25.66■■□□□ 1.7
CHL1O00533 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHL1O00533 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CHL1O00533 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC25.66■■□□□ 1.7
CHL1O00533 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHL1O00533 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CHL1O00533 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHL1O00533 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC25.66■■□□□ 1.7
CHL1O00533 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHL1O00533 AC099778.1-201ENST00000568593 1911 ntBASIC25.66■■□□□ 1.7
CHL1O00533 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CHL1O00533 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHL1O00533 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CHL1O00533 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC25.66■■□□□ 1.7
CHL1O00533 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHL1O00533 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC25.65■■□□□ 1.7
CHL1O00533 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHL1O00533 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHL1O00533 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
CHL1O00533 RARRES2P10-201ENST00000564312 460 ntBASIC25.65■■□□□ 1.7
CHL1O00533 MOK-225ENST00000522867 1883 ntTSL 5 BASIC25.65■■□□□ 1.7
CHL1O00533 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHL1O00533 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHL1O00533 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHL1O00533 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CHL1O00533 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.7
CHL1O00533 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC25.64■■□□□ 1.7
CHL1O00533 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
CHL1O00533 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHL1O00533 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
CHL1O00533 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHL1O00533 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
CHL1O00533 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
CHL1O00533 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CHL1O00533 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CHL1O00533 RPS2P55-201ENST00000397318 883 ntBASIC25.64■■□□□ 1.7
CHL1O00533 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CHL1O00533 AL596275.1-201ENST00000423464 877 ntBASIC25.64■■□□□ 1.7
CHL1O00533 AC107956.1-201ENST00000494359 873 ntBASIC25.64■■□□□ 1.7
CHL1O00533 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CHL1O00533 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC25.64■■□□□ 1.7
CHL1O00533 AC233702.5-201ENST00000584107 538 ntBASIC25.64■■□□□ 1.7
CHL1O00533 CABP2-204ENST00000636477 941 ntTSL 5 BASIC25.64■■□□□ 1.7
CHL1O00533 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHL1O00533 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC25.64■■□□□ 1.69
CHL1O00533 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CHL1O00533 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC25.64■■□□□ 1.69
CHL1O00533 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC25.63■■□□□ 1.69
CHL1O00533 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
CHL1O00533 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHL1O00533 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHL1O00533 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHL1O00533 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHL1O00533 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC25.63■■□□□ 1.69
CHL1O00533 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHL1O00533 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHL1O00533 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHL1O00533 AC012618.2-201ENST00000428058 849 ntBASIC25.63■■□□□ 1.69
CHL1O00533 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHL1O00533 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHL1O00533 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC25.63■■□□□ 1.69
CHL1O00533 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC25.63■■□□□ 1.69
CHL1O00533 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHL1O00533 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
CHL1O00533 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC25.63■■□□□ 1.69
CHL1O00533 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC25.63■■□□□ 1.69
CHL1O00533 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHL1O00533 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC25.63■■□□□ 1.69
CHL1O00533 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHL1O00533 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHL1O00533 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC25.63■■□□□ 1.69
CHL1O00533 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHL1O00533 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms