Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CLDN5O00501 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.03■□□□□ 0.96
CLDN5O00501 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CLDN5O00501 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN5O00501 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN5O00501 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.03■□□□□ 0.96
CLDN5O00501 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN5O00501 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN5O00501 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN5O00501 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN5O00501 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.02■□□□□ 0.96
CLDN5O00501 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN5O00501 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN5O00501 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN5O00501 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN5O00501 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN5O00501 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN5O00501 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN5O00501 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.02■□□□□ 0.96
CLDN5O00501 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.02■□□□□ 0.96
CLDN5O00501 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.02■□□□□ 0.96
CLDN5O00501 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.02■□□□□ 0.96
CLDN5O00501 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.02■□□□□ 0.96
CLDN5O00501 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.02■□□□□ 0.96
CLDN5O00501 AL121906.2-201ENST00000621597 723 ntBASIC21.02■□□□□ 0.96
CLDN5O00501 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN5O00501 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN5O00501 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN5O00501 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
CLDN5O00501 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CLDN5O00501 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.01■□□□□ 0.95
CLDN5O00501 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN5O00501 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN5O00501 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.01■□□□□ 0.95
CLDN5O00501 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.01■□□□□ 0.95
CLDN5O00501 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.01■□□□□ 0.95
CLDN5O00501 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN5O00501 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.01■□□□□ 0.95
CLDN5O00501 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.01■□□□□ 0.95
CLDN5O00501 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.01■□□□□ 0.95
CLDN5O00501 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.01■□□□□ 0.95
CLDN5O00501 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN5O00501 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN5O00501 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.01■□□□□ 0.95
CLDN5O00501 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN5O00501 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN5O00501 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN5O00501 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.01■□□□□ 0.95
CLDN5O00501 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN5O00501 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CLDN5O00501 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN5O00501 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CLDN5O00501 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN5O00501 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN5O00501 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21■□□□□ 0.95
CLDN5O00501 AC093827.2-201ENST00000512654 315 ntBASIC21■□□□□ 0.95
CLDN5O00501 PRKY-204ENST00000533551 1019 ntBASIC21■□□□□ 0.95
CLDN5O00501 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21■□□□□ 0.95
CLDN5O00501 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21■□□□□ 0.95
CLDN5O00501 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21■□□□□ 0.95
CLDN5O00501 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN5O00501 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN5O00501 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CLDN5O00501 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN5O00501 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN5O00501 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CLDN5O00501 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21■□□□□ 0.95
CLDN5O00501 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21■□□□□ 0.95
CLDN5O00501 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21■□□□□ 0.95
CLDN5O00501 AC099778.1-201ENST00000568593 1911 ntBASIC21■□□□□ 0.95
CLDN5O00501 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN5O00501 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.99■□□□□ 0.95
CLDN5O00501 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.99■□□□□ 0.95
CLDN5O00501 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN5O00501 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN5O00501 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN5O00501 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN5O00501 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.99■□□□□ 0.95
CLDN5O00501 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
CLDN5O00501 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN5O00501 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CLDN5O00501 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.99■□□□□ 0.95
CLDN5O00501 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN5O00501 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.99■□□□□ 0.95
CLDN5O00501 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.99■□□□□ 0.95
CLDN5O00501 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN5O00501 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.99■□□□□ 0.95
CLDN5O00501 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.99■□□□□ 0.95
CLDN5O00501 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.99■□□□□ 0.95
CLDN5O00501 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN5O00501 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN5O00501 AC112907.3-201ENST00000577781 2400 ntBASIC20.99■□□□□ 0.95
CLDN5O00501 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.99■□□□□ 0.95
CLDN5O00501 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN5O00501 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.99■□□□□ 0.95
CLDN5O00501 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN5O00501 AL691432.2-201ENST00000607222 2038 ntBASIC20.99■□□□□ 0.95
CLDN5O00501 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN5O00501 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CLDN5O00501 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms