Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.71■□□□□ 0.1
RBFOX3A6NFN3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
RBFOX3A6NFN3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.71■□□□□ 0.1
RBFOX3A6NFN3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RBFOX3A6NFN3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RBFOX3A6NFN3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 BX119927.1-201ENST00000636596 1552 ntBASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 NOC2LP1-202ENST00000452600 2235 ntBASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RBFOX3A6NFN3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 AC006455.2-201ENST00000429931 906 ntBASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RBFOX3A6NFN3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 NOC2LP2-201ENST00000407594 1944 ntBASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RBFOX3A6NFN3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RBFOX3A6NFN3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms