Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 AC007375.3-201ENST00000600936 2314 ntBASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TBC1D3FA6NER0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TBC1D3FA6NER0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D3FA6NER0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D3FA6NER0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.85■□□□□ 0.77
TBC1D3FA6NER0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D3FA6NER0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D3FA6NER0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TBC1D3FA6NER0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D3FA6NER0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.85■□□□□ 0.77
TBC1D3FA6NER0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.85■□□□□ 0.77
TBC1D3FA6NER0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D3FA6NER0 CD177P1-201ENST00000606252 935 ntBASIC19.85■□□□□ 0.77
TBC1D3FA6NER0 AC026471.5-201ENST00000615068 467 ntBASIC19.85■□□□□ 0.77
TBC1D3FA6NER0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D3FA6NER0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D3FA6NER0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
TBC1D3FA6NER0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D3FA6NER0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TBC1D3FA6NER0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.84■□□□□ 0.77
TBC1D3FA6NER0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D3FA6NER0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.84■□□□□ 0.77
TBC1D3FA6NER0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D3FA6NER0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D3FA6NER0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D3FA6NER0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TBC1D3FA6NER0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D3FA6NER0 TSPY15P-201ENST00000457163 923 ntBASIC19.84■□□□□ 0.77
TBC1D3FA6NER0 AL355075.4-201ENST00000554988 638 ntBASIC19.84■□□□□ 0.77
TBC1D3FA6NER0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D3FA6NER0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D3FA6NER0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D3FA6NER0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.84■□□□□ 0.77
TBC1D3FA6NER0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D3FA6NER0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TBC1D3FA6NER0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 FAM197Y1-201ENST00000421178 764 ntBASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 AP002982.1-201ENST00000492365 877 ntBASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 AP003071.4-201ENST00000562276 1284 ntBASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 LINC01023-201ENST00000606054 436 ntBASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 AC073195.1-201ENST00000607241 877 ntBASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.83■□□□□ 0.77
TBC1D3FA6NER0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TBC1D3FA6NER0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TBC1D3FA6NER0 KRT16P6-202ENST00000425692 1426 ntBASIC19.83■□□□□ 0.76
TBC1D3FA6NER0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TBC1D3FA6NER0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.83■□□□□ 0.76
TBC1D3FA6NER0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TBC1D3FA6NER0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.83■□□□□ 0.76
TBC1D3FA6NER0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
TBC1D3FA6NER0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.83■□□□□ 0.76
TBC1D3FA6NER0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TBC1D3FA6NER0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3FA6NER0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3FA6NER0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3FA6NER0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3FA6NER0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3FA6NER0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.82■□□□□ 0.76
TBC1D3FA6NER0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.82■□□□□ 0.76
TBC1D3FA6NER0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.82■□□□□ 0.76
TBC1D3FA6NER0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.82■□□□□ 0.76
TBC1D3FA6NER0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3FA6NER0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.82■□□□□ 0.76
TBC1D3FA6NER0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.82■□□□□ 0.76
TBC1D3FA6NER0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.82■□□□□ 0.76
TBC1D3FA6NER0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TBC1D3FA6NER0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3FA6NER0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TBC1D3FA6NER0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TBC1D3FA6NER0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.82■□□□□ 0.76
TBC1D3FA6NER0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
TBC1D3FA6NER0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TBC1D3FA6NER0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms