Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
HFM1A2PYH4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC29.56■■■□□ 2.32
HFM1A2PYH4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
HFM1A2PYH4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
HFM1A2PYH4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
HFM1A2PYH4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
HFM1A2PYH4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
HFM1A2PYH4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
HFM1A2PYH4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
HFM1A2PYH4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
HFM1A2PYH4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
HFM1A2PYH4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
HFM1A2PYH4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC29.55■■■□□ 2.32
HFM1A2PYH4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC29.55■■■□□ 2.32
HFM1A2PYH4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
HFM1A2PYH4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC29.55■■■□□ 2.32
HFM1A2PYH4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
HFM1A2PYH4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
HFM1A2PYH4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC29.55■■■□□ 2.32
HFM1A2PYH4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC29.55■■■□□ 2.32
HFM1A2PYH4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
HFM1A2PYH4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
HFM1A2PYH4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
HFM1A2PYH4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
HFM1A2PYH4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
HFM1A2PYH4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC29.54■■■□□ 2.32
HFM1A2PYH4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
HFM1A2PYH4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
HFM1A2PYH4 AC113410.3-201ENST00000623366 203 ntBASIC29.54■■■□□ 2.32
HFM1A2PYH4 AC099778.1-201ENST00000568593 1911 ntBASIC29.54■■■□□ 2.32
HFM1A2PYH4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
HFM1A2PYH4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
HFM1A2PYH4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
HFM1A2PYH4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC29.54■■■□□ 2.32
HFM1A2PYH4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC29.54■■■□□ 2.32
HFM1A2PYH4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC29.54■■■□□ 2.32
HFM1A2PYH4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC29.54■■■□□ 2.32
HFM1A2PYH4 AL353708.3-201ENST00000610272 989 ntBASIC29.54■■■□□ 2.32
HFM1A2PYH4 AL049637.2-201ENST00000641778 930 ntBASIC29.54■■■□□ 2.32
HFM1A2PYH4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
HFM1A2PYH4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC29.53■■■□□ 2.32
HFM1A2PYH4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC29.53■■■□□ 2.32
HFM1A2PYH4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC29.53■■■□□ 2.32
HFM1A2PYH4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
HFM1A2PYH4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
HFM1A2PYH4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
HFM1A2PYH4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
HFM1A2PYH4 KRT18P16-201ENST00000510337 1294 ntBASIC29.53■■■□□ 2.32
HFM1A2PYH4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC29.53■■■□□ 2.32
HFM1A2PYH4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC29.53■■■□□ 2.32
HFM1A2PYH4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC29.53■■■□□ 2.32
HFM1A2PYH4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC29.53■■■□□ 2.32
HFM1A2PYH4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
HFM1A2PYH4 AL691432.2-201ENST00000607222 2038 ntBASIC29.53■■■□□ 2.32
HFM1A2PYH4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
HFM1A2PYH4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
HFM1A2PYH4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC29.52■■■□□ 2.32
HFM1A2PYH4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC29.52■■■□□ 2.32
HFM1A2PYH4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
HFM1A2PYH4 AP001271.2-201ENST00000624018 1556 ntBASIC29.52■■■□□ 2.32
HFM1A2PYH4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
HFM1A2PYH4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
HFM1A2PYH4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
HFM1A2PYH4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
HFM1A2PYH4 AP006587.1-201ENST00000534129 1502 ntBASIC29.52■■■□□ 2.32
HFM1A2PYH4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC29.52■■■□□ 2.32
HFM1A2PYH4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
HFM1A2PYH4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC29.52■■■□□ 2.32
HFM1A2PYH4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC29.52■■■□□ 2.32
HFM1A2PYH4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC29.52■■■□□ 2.32
HFM1A2PYH4 AL135905.2-201ENST00000584934 1404 ntBASIC29.52■■■□□ 2.32
HFM1A2PYH4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC29.52■■■□□ 2.32
HFM1A2PYH4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
HFM1A2PYH4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
HFM1A2PYH4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
HFM1A2PYH4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC29.51■■■□□ 2.31
HFM1A2PYH4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
HFM1A2PYH4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
HFM1A2PYH4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
HFM1A2PYH4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC29.51■■■□□ 2.31
HFM1A2PYH4 MIR4497-201ENST00000583208 89 ntBASIC29.51■■■□□ 2.31
HFM1A2PYH4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC29.51■■■□□ 2.31
HFM1A2PYH4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
HFM1A2PYH4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
HFM1A2PYH4 LINC01006-201ENST00000333319 2292 ntBASIC29.51■■■□□ 2.31
HFM1A2PYH4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
HFM1A2PYH4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
HFM1A2PYH4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
HFM1A2PYH4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
HFM1A2PYH4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC29.5■■■□□ 2.31
HFM1A2PYH4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
HFM1A2PYH4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC29.5■■■□□ 2.31
HFM1A2PYH4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC29.5■■■□□ 2.31
HFM1A2PYH4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC29.5■■■□□ 2.31
HFM1A2PYH4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC29.5■■■□□ 2.31
HFM1A2PYH4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
HFM1A2PYH4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
HFM1A2PYH4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
HFM1A2PYH4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC29.49■■■□□ 2.31
HFM1A2PYH4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms