Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SSC5DA1L4H1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.35■■□□□ 1.33
SSC5DA1L4H1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SSC5DA1L4H1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SSC5DA1L4H1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.35■■□□□ 1.33
SSC5DA1L4H1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SSC5DA1L4H1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.35■■□□□ 1.33
SSC5DA1L4H1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
SSC5DA1L4H1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.35■■□□□ 1.33
SSC5DA1L4H1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.35■■□□□ 1.33
SSC5DA1L4H1 AK4P3-201ENST00000418260 669 ntBASIC23.35■■□□□ 1.33
SSC5DA1L4H1 CRYGFP-201ENST00000418459 633 ntBASIC23.35■■□□□ 1.33
SSC5DA1L4H1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC23.35■■□□□ 1.33
SSC5DA1L4H1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.35■■□□□ 1.33
SSC5DA1L4H1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SSC5DA1L4H1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SSC5DA1L4H1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SSC5DA1L4H1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.34■■□□□ 1.33
SSC5DA1L4H1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
SSC5DA1L4H1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.34■■□□□ 1.33
SSC5DA1L4H1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SSC5DA1L4H1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SSC5DA1L4H1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SSC5DA1L4H1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SSC5DA1L4H1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SSC5DA1L4H1 UPK3BP1-201ENST00000428678 509 ntBASIC23.34■■□□□ 1.33
SSC5DA1L4H1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.34■■□□□ 1.33
SSC5DA1L4H1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC23.34■■□□□ 1.33
SSC5DA1L4H1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
SSC5DA1L4H1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SSC5DA1L4H1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SSC5DA1L4H1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SSC5DA1L4H1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC23.33■■□□□ 1.33
SSC5DA1L4H1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC23.33■■□□□ 1.33
SSC5DA1L4H1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC23.33■■□□□ 1.33
SSC5DA1L4H1 TFP1-202ENST00000475455 1573 ntBASIC23.33■■□□□ 1.33
SSC5DA1L4H1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SSC5DA1L4H1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
SSC5DA1L4H1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
SSC5DA1L4H1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
SSC5DA1L4H1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
SSC5DA1L4H1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SSC5DA1L4H1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
SSC5DA1L4H1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SSC5DA1L4H1 AC005229.4-201ENST00000610085 2198 ntBASIC23.32■■□□□ 1.32
SSC5DA1L4H1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SSC5DA1L4H1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.32■■□□□ 1.32
SSC5DA1L4H1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SSC5DA1L4H1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SSC5DA1L4H1 RCC2P6-201ENST00000526625 1557 ntBASIC23.32■■□□□ 1.32
SSC5DA1L4H1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
SSC5DA1L4H1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SSC5DA1L4H1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC23.32■■□□□ 1.32
SSC5DA1L4H1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SSC5DA1L4H1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SSC5DA1L4H1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SSC5DA1L4H1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.32■■□□□ 1.32
SSC5DA1L4H1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC23.32■■□□□ 1.32
SSC5DA1L4H1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.32■■□□□ 1.32
SSC5DA1L4H1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SSC5DA1L4H1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SSC5DA1L4H1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SSC5DA1L4H1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SSC5DA1L4H1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SSC5DA1L4H1 FAM8A6P-201ENST00000407496 1135 ntBASIC23.31■■□□□ 1.32
SSC5DA1L4H1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC23.31■■□□□ 1.32
SSC5DA1L4H1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SSC5DA1L4H1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SSC5DA1L4H1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SSC5DA1L4H1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SSC5DA1L4H1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC23.31■■□□□ 1.32
SSC5DA1L4H1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
SSC5DA1L4H1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SSC5DA1L4H1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SSC5DA1L4H1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SSC5DA1L4H1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SSC5DA1L4H1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC23.31■■□□□ 1.32
SSC5DA1L4H1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SSC5DA1L4H1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
SSC5DA1L4H1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SSC5DA1L4H1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
SSC5DA1L4H1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SSC5DA1L4H1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SSC5DA1L4H1 AC008040.2-201ENST00000461049 708 ntBASIC23.3■■□□□ 1.32
SSC5DA1L4H1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC23.3■■□□□ 1.32
SSC5DA1L4H1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC23.3■■□□□ 1.32
SSC5DA1L4H1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
SSC5DA1L4H1 AL138966.2-201ENST00000621997 464 ntBASIC23.3■■□□□ 1.32
SSC5DA1L4H1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SSC5DA1L4H1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.3■■□□□ 1.32
SSC5DA1L4H1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SSC5DA1L4H1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SSC5DA1L4H1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SSC5DA1L4H1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SSC5DA1L4H1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SSC5DA1L4H1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SSC5DA1L4H1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SSC5DA1L4H1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC23.29■■□□□ 1.32
SSC5DA1L4H1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC23.29■■□□□ 1.32
SSC5DA1L4H1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms