Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 AC007342.9-201ENST00000623877 1385 ntBASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 RN7SKP47-201ENST00000365347 328 ntBASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 IGKV1OR2-3-201ENST00000411475 288 ntBASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 MRPS21P5-201ENST00000417885 231 ntBASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 AC093664.1-201ENST00000511779 289 ntBASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 SNRPCP6-201ENST00000528310 210 ntBASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 AC093283.1-201ENST00000565306 1075 ntBASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 AL121936.2-201ENST00000641935 662 ntBASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM71Q2Q1W2 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 CUBNP3-201ENST00000457461 1784 ntBASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 ABCA11P-202ENST00000504019 2110 ntBASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 RNA5SP474-201ENST00000391234 90 ntBASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 AL139158.1-201ENST00000424719 340 ntBASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 AC092106.2-201ENST00000436597 487 ntBASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 RPL5P10-201ENST00000445207 894 ntBASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 RN7SL216P-201ENST00000471607 298 ntBASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 TDGP1-201ENST00000543961 1229 ntBASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 AC037479.1-201ENST00000558361 625 ntBASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 PRELID3BP3-201ENST00000584963 545 ntBASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 AC063977.7-201ENST00000594454 337 ntBASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 MTCO1P8-201ENST00000416914 1523 ntBASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TRIM71Q2Q1W2 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 CDY7P-201ENST00000429883 1604 ntBASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 RNA5SP512-201ENST00000364550 120 ntBASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 RPL5P8-201ENST00000396820 815 ntBASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 AC244033.1-201ENST00000426826 870 ntBASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 NFYAP1-201ENST00000431953 972 ntBASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.5□□□□□ -1.21
TRIM71Q2Q1W2 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms