Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.62□□□□□ -1.19
CIITAP33076 AC245452.2-201ENST00000435222 392 ntBASIC7.62□□□□□ -1.19
CIITAP33076 SNRPBP1-201ENST00000443634 282 ntBASIC7.62□□□□□ -1.19
CIITAP33076 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CIITAP33076 AL390198.2-201ENST00000510553 222 ntBASIC7.62□□□□□ -1.19
CIITAP33076 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.62□□□□□ -1.19
CIITAP33076 AC113191.1-201ENST00000517759 403 ntBASIC7.62□□□□□ -1.19
CIITAP33076 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC7.62□□□□□ -1.19
CIITAP33076 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC7.62□□□□□ -1.19
CIITAP33076 AC091304.4-201ENST00000565703 620 ntBASIC7.62□□□□□ -1.19
CIITAP33076 RPL29P33-201ENST00000587474 316 ntBASIC7.62□□□□□ -1.19
CIITAP33076 MIR6885-201ENST00000612241 66 ntBASIC7.62□□□□□ -1.19
CIITAP33076 OR1N1-202ENST00000619659 939 ntBASIC7.62□□□□□ -1.19
CIITAP33076 AC211486.4-201ENST00000621495 113 ntBASIC7.62□□□□□ -1.19
CIITAP33076 RAB28P4-201ENST00000622233 665 ntBASIC7.62□□□□□ -1.19
CIITAP33076 AL035425.4-201ENST00000624509 1063 ntBASIC7.62□□□□□ -1.19
CIITAP33076 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.62□□□□□ -1.19
CIITAP33076 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC7.62□□□□□ -1.19
CIITAP33076 AC099654.15-201ENST00000639802 509 ntBASIC7.62□□□□□ -1.19
CIITAP33076 AL354702.2-202ENST00000641481 890 ntBASIC7.62□□□□□ -1.19
CIITAP33076 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
CIITAP33076 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CIITAP33076 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CIITAP33076 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CIITAP33076 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.62□□□□□ -1.19
CIITAP33076 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
CIITAP33076 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CIITAP33076 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.62□□□□□ -1.19
CIITAP33076 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.62□□□□□ -1.19
CIITAP33076 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
CIITAP33076 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CIITAP33076 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CIITAP33076 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CIITAP33076 FANCD2P2-201ENST00000437591 1400 ntBASIC7.61□□□□□ -1.19
CIITAP33076 MTND5P12-201ENST00000502851 1449 ntBASIC7.61□□□□□ -1.19
CIITAP33076 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
CIITAP33076 SALL4P7-201ENST00000555779 3120 ntBASIC7.61□□□□□ -1.19
CIITAP33076 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CIITAP33076 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CIITAP33076 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CIITAP33076 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.61□□□□□ -1.19
CIITAP33076 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CIITAP33076 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CIITAP33076 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CIITAP33076 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
CIITAP33076 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC7.61□□□□□ -1.19
CIITAP33076 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.61□□□□□ -1.19
CIITAP33076 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.61□□□□□ -1.19
CIITAP33076 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC7.61□□□□□ -1.19
CIITAP33076 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.61□□□□□ -1.19
CIITAP33076 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.61□□□□□ -1.19
CIITAP33076 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.61□□□□□ -1.19
CIITAP33076 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.61□□□□□ -1.19
CIITAP33076 RN7SL705P-201ENST00000481678 294 ntBASIC7.61□□□□□ -1.19
CIITAP33076 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CIITAP33076 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.61□□□□□ -1.19
CIITAP33076 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC7.61□□□□□ -1.19
CIITAP33076 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.61□□□□□ -1.19
CIITAP33076 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CIITAP33076 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.61□□□□□ -1.19
CIITAP33076 AC092375.1-201ENST00000550410 637 ntBASIC7.61□□□□□ -1.19
CIITAP33076 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.61□□□□□ -1.19
CIITAP33076 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC7.61□□□□□ -1.19
CIITAP33076 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC7.61□□□□□ -1.19
CIITAP33076 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7.61□□□□□ -1.19
CIITAP33076 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.61□□□□□ -1.19
CIITAP33076 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.61□□□□□ -1.19
CIITAP33076 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.61□□□□□ -1.19
CIITAP33076 AC245052.7-201ENST00000601161 359 ntBASIC7.61□□□□□ -1.19
CIITAP33076 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CIITAP33076 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.61□□□□□ -1.19
CIITAP33076 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.61□□□□□ -1.19
CIITAP33076 RPSAP68-201ENST00000625020 438 ntBASIC7.61□□□□□ -1.19
CIITAP33076 AL034408.1-201ENST00000637712 664 ntBASIC7.61□□□□□ -1.19
CIITAP33076 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CIITAP33076 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.61□□□□□ -1.19
CIITAP33076 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.61□□□□□ -1.19
CIITAP33076 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CIITAP33076 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CIITAP33076 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CIITAP33076 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CIITAP33076 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.61□□□□□ -1.19
CIITAP33076 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CIITAP33076 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.61□□□□□ -1.19
CIITAP33076 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC7.61□□□□□ -1.19
CIITAP33076 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.6□□□□□ -1.19
CIITAP33076 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CIITAP33076 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CIITAP33076 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CIITAP33076 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CIITAP33076 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.6□□□□□ -1.19
CIITAP33076 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.6□□□□□ -1.19
CIITAP33076 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CIITAP33076 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
CIITAP33076 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.6□□□□□ -1.19
CIITAP33076 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
CIITAP33076 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CIITAP33076 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
CIITAP33076 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CIITAP33076 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms