Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC244034.2-201ENST00000562504 509 ntBASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 AC090079.2-201ENST00000575289 768 ntBASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 RN7SL366P-201ENST00000577957 292 ntBASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 AC087468.1-201ENST00000604365 630 ntBASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 GAPDHP41-201ENST00000613707 975 ntBASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 AP002371.2-201ENST00000624450 503 ntBASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 CDY19P-201ENST00000411668 1613 ntBASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 CDY18P-201ENST00000438294 1609 ntBASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC187A0A096LP49 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 TMEM75-201ENST00000624314 2165 ntBASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 ATP5BP1-201ENST00000411980 1574 ntBASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 SNORA64.3-201ENST00000365647 134 ntBASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 OR6K3-202ENST00000368146 996 ntBASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 AC008171.1-201ENST00000395058 200 ntBASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 UBTFL2-201ENST00000411859 1191 ntBASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 TIMM8BP2-201ENST00000445940 251 ntBASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 AC010878.1-201ENST00000456500 1047 ntBASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 MARK2P8-201ENST00000476069 952 ntBASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 OR7E154P-201ENST00000525174 932 ntBASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 ADAD1P2-201ENST00000588476 646 ntBASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 AC092474.3-201ENST00000603022 568 ntBASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 AC022387.2-201ENST00000604050 448 ntBASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 AC104184.1-201ENST00000607513 721 ntBASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 AC099667.1-201ENST00000624222 469 ntBASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 KARSP2-201ENST00000415696 1639 ntBASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 FANCD2P2-201ENST00000437591 1400 ntBASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC187A0A096LP49 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC187A0A096LP49 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC187A0A096LP49 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms