Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
LMO3Q8TAP4 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
LMO3Q8TAP4 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LMO3Q8TAP4 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
LMO3Q8TAP4 AL589993.1-201ENST00000407450 2524 ntBASIC7.12□□□□□ -1.27
LMO3Q8TAP4 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 AC010624.4-201ENST00000597606 1351 ntBASIC7.12□□□□□ -1.27
LMO3Q8TAP4 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 RNU1-46P-201ENST00000384425 164 ntBASIC7.12□□□□□ -1.27
LMO3Q8TAP4 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 FDPSP5-201ENST00000399474 1057 ntBASIC7.12□□□□□ -1.27
LMO3Q8TAP4 AL353133.1-201ENST00000407695 401 ntBASIC7.12□□□□□ -1.27
LMO3Q8TAP4 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 SNRPBP1-201ENST00000443634 282 ntBASIC7.12□□□□□ -1.27
LMO3Q8TAP4 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 EIF3LP2-201ENST00000457262 807 ntBASIC7.12□□□□□ -1.27
LMO3Q8TAP4 TREML3P-201ENST00000457327 501 ntBASIC7.12□□□□□ -1.27
LMO3Q8TAP4 AC091917.2-201ENST00000505002 744 ntBASIC7.12□□□□□ -1.27
LMO3Q8TAP4 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 SCARNA5-201ENST00000516201 276 ntBASIC7.12□□□□□ -1.27
LMO3Q8TAP4 RN7SKP196-201ENST00000516267 345 ntBASIC7.12□□□□□ -1.27
LMO3Q8TAP4 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 AC026956.1-201ENST00000558741 396 ntBASIC7.12□□□□□ -1.27
LMO3Q8TAP4 MIR3159-201ENST00000584572 74 ntBASIC7.12□□□□□ -1.27
LMO3Q8TAP4 RPL29P33-201ENST00000587474 316 ntBASIC7.12□□□□□ -1.27
LMO3Q8TAP4 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 AL137246.1-201ENST00000607072 977 ntBASIC7.12□□□□□ -1.27
LMO3Q8TAP4 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 AC127071.2-201ENST00000623293 527 ntBASIC7.12□□□□□ -1.27
LMO3Q8TAP4 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 AC009220.2-201ENST00000489759 1751 ntBASIC7.12□□□□□ -1.27
LMO3Q8TAP4 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 AL731556.1-201ENST00000394628 3711 ntBASIC7.12□□□□□ -1.27
LMO3Q8TAP4 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
LMO3Q8TAP4 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 AL391261.1-201ENST00000555712 1479 ntBASIC7.11□□□□□ -1.27
LMO3Q8TAP4 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 OR7A2P-201ENST00000304105 930 ntBASIC7.11□□□□□ -1.27
LMO3Q8TAP4 PPIAP24-201ENST00000328558 471 ntBASIC7.11□□□□□ -1.27
LMO3Q8TAP4 SNORA38B-201ENST00000363524 131 ntBASIC7.11□□□□□ -1.27
LMO3Q8TAP4 AL359092.1-201ENST00000417156 265 ntBASIC7.11□□□□□ -1.27
LMO3Q8TAP4 PTPN2P1-201ENST00000423212 1072 ntBASIC7.11□□□□□ -1.27
LMO3Q8TAP4 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 SLAMF6P1-201ENST00000451067 602 ntBASIC7.11□□□□□ -1.27
LMO3Q8TAP4 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 RN7SL70P-201ENST00000478322 302 ntBASIC7.11□□□□□ -1.27
LMO3Q8TAP4 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 RNA5SP96-201ENST00000516041 107 ntBASIC7.11□□□□□ -1.27
LMO3Q8TAP4 IGLV3-6-201ENST00000523937 250 ntBASIC7.11□□□□□ -1.27
LMO3Q8TAP4 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 BUB1P1-201ENST00000603541 607 ntBASIC7.11□□□□□ -1.27
LMO3Q8TAP4 AC025171.4-201ENST00000607250 1047 ntBASIC7.11□□□□□ -1.27
LMO3Q8TAP4 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 RAB28P4-201ENST00000622233 665 ntBASIC7.11□□□□□ -1.27
LMO3Q8TAP4 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 AP002370.1-201ENST00000528055 1602 ntBASIC7.11□□□□□ -1.27
LMO3Q8TAP4 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LMO3Q8TAP4 BRD7P6-201ENST00000431406 1860 ntBASIC7.11□□□□□ -1.27
LMO3Q8TAP4 AC087392.3-202ENST00000358446 1754 ntBASIC7.1□□□□□ -1.27
LMO3Q8TAP4 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms