Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
NEK3P51956 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.28□□□□□ -1.24
NEK3P51956 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
NEK3P51956 AC007406.5-201ENST00000570140 3170 ntBASIC7.28□□□□□ -1.24
NEK3P51956 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
NEK3P51956 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.28□□□□□ -1.24
NEK3P51956 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.28□□□□□ -1.24
NEK3P51956 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.27□□□□□ -1.24
NEK3P51956 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC7.27□□□□□ -1.24
NEK3P51956 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.27□□□□□ -1.24
NEK3P51956 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.24
NEK3P51956 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
NEK3P51956 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
NEK3P51956 AC022507.1-201ENST00000548349 1505 ntBASIC7.27□□□□□ -1.25
NEK3P51956 AC012213.2-201ENST00000562917 4597 ntBASIC7.27□□□□□ -1.25
NEK3P51956 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
NEK3P51956 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
NEK3P51956 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
NEK3P51956 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
NEK3P51956 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
NEK3P51956 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.27□□□□□ -1.25
NEK3P51956 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
NEK3P51956 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
NEK3P51956 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
NEK3P51956 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
NEK3P51956 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
NEK3P51956 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
NEK3P51956 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
NEK3P51956 U3.48-201ENST00000363172 216 ntBASIC7.27□□□□□ -1.25
NEK3P51956 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
NEK3P51956 ZNF37CP-201ENST00000406795 241 ntBASIC7.27□□□□□ -1.25
NEK3P51956 AL157698.1-201ENST00000415190 1011 ntBASIC7.27□□□□□ -1.25
NEK3P51956 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC7.27□□□□□ -1.25
NEK3P51956 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC7.27□□□□□ -1.25
NEK3P51956 AC010086.1-201ENST00000437359 1052 ntBASIC7.27□□□□□ -1.25
NEK3P51956 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC7.27□□□□□ -1.25
NEK3P51956 RN7SL306P-201ENST00000492941 296 ntBASIC7.27□□□□□ -1.25
NEK3P51956 RPL7L1P7-201ENST00000509986 724 ntBASIC7.27□□□□□ -1.25
NEK3P51956 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC7.27□□□□□ -1.25
NEK3P51956 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NEK3P51956 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7.27□□□□□ -1.25
NEK3P51956 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC7.27□□□□□ -1.25
NEK3P51956 AP001646.2-201ENST00000528645 1156 ntBASIC7.27□□□□□ -1.25
NEK3P51956 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
NEK3P51956 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.27□□□□□ -1.25
NEK3P51956 OR4N3P-201ENST00000559395 818 ntBASIC7.27□□□□□ -1.25
NEK3P51956 AL031846.1-201ENST00000560933 314 ntBASIC7.27□□□□□ -1.25
NEK3P51956 FCGR1CP-201ENST00000579737 1127 ntBASIC7.27□□□□□ -1.25
NEK3P51956 RN7SL667P-201ENST00000582817 298 ntBASIC7.27□□□□□ -1.25
NEK3P51956 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC7.27□□□□□ -1.25
NEK3P51956 AC007620.3-201ENST00000608131 497 ntBASIC7.27□□□□□ -1.25
NEK3P51956 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.27□□□□□ -1.25
NEK3P51956 AL031777.2-201ENST00000611953 196 ntBASIC7.27□□□□□ -1.25
NEK3P51956 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC7.27□□□□□ -1.25
NEK3P51956 AC026367.3-201ENST00000619032 590 ntBASIC7.27□□□□□ -1.25
NEK3P51956 AC135068.4-201ENST00000622949 925 ntBASIC7.27□□□□□ -1.25
NEK3P51956 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC7.27□□□□□ -1.25
NEK3P51956 AC004808.2-201ENST00000627965 773 ntBASIC7.27□□□□□ -1.25
NEK3P51956 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
NEK3P51956 AC093844.1-201ENST00000514910 1361 ntBASIC7.27□□□□□ -1.25
NEK3P51956 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NEK3P51956 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC7.27□□□□□ -1.25
NEK3P51956 AC112255.1-201ENST00000624070 2493 ntBASIC7.27□□□□□ -1.25
NEK3P51956 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
NEK3P51956 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.27□□□□□ -1.25
NEK3P51956 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.27□□□□□ -1.25
NEK3P51956 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.27□□□□□ -1.25
NEK3P51956 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
NEK3P51956 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NEK3P51956 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.27□□□□□ -1.25
NEK3P51956 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.27□□□□□ -1.25
NEK3P51956 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.27□□□□□ -1.25
NEK3P51956 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NEK3P51956 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.26□□□□□ -1.25
NEK3P51956 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.26□□□□□ -1.25
NEK3P51956 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.26□□□□□ -1.25
NEK3P51956 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NEK3P51956 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
NEK3P51956 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.26□□□□□ -1.25
NEK3P51956 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.26□□□□□ -1.25
NEK3P51956 AC122713.2-201ENST00000624942 3335 ntBASIC7.26□□□□□ -1.25
NEK3P51956 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NEK3P51956 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.26□□□□□ -1.25
NEK3P51956 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.26□□□□□ -1.25
NEK3P51956 AC112243.1-201ENST00000623949 3851 ntBASIC7.26□□□□□ -1.25
NEK3P51956 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.26□□□□□ -1.25
NEK3P51956 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.26□□□□□ -1.25
NEK3P51956 Z83820.1-201ENST00000456978 1499 ntBASIC7.26□□□□□ -1.25
NEK3P51956 CNOT6LP1-201ENST00000559681 1462 ntBASIC7.26□□□□□ -1.25
NEK3P51956 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NEK3P51956 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.26□□□□□ -1.25
NEK3P51956 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
NEK3P51956 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NEK3P51956 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
NEK3P51956 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NEK3P51956 RPL12P13-201ENST00000310055 497 ntBASIC7.26□□□□□ -1.25
NEK3P51956 RNU12-2P-201ENST00000364789 156 ntBASIC7.26□□□□□ -1.25
NEK3P51956 AC091492.1-201ENST00000419844 272 ntBASIC7.26□□□□□ -1.25
NEK3P51956 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NEK3P51956 AL590623.1-201ENST00000427864 105 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms