Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 SNRPCP20-201ENST00000588011 210 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 PRR13P5-201ENST00000596581 442 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AL136141.1-201ENST00000605780 369 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AC023310.4-201ENST00000613130 650 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AC005393.1-201ENST00000617916 584 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AL354718.1-201ENST00000619764 589 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AC092724.1-201ENST00000624623 3397 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AC013268.3-201ENST00000262716 2324 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AL591135.1-201ENST00000401578 5914 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 ATP5BP1-201ENST00000411980 1574 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 PCNAP3-201ENST00000397222 778 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 RPL23AP17-201ENST00000401064 499 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 RN7SKP254-201ENST00000410685 310 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 GAPDHP73-201ENST00000423411 1007 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AL606752.1-201ENST00000435442 666 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AL390879.1-201ENST00000439143 386 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 RPL24P8-201ENST00000446071 474 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 SCDP1-201ENST00000455244 1081 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 RPSAP7-201ENST00000456871 885 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AC109454.1-201ENST00000471205 498 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AC092824.1-201ENST00000483524 576 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AC090058.1-201ENST00000498788 435 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AC026700.1-201ENST00000512074 544 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AP001124.1-201ENST00000529628 385 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 OR52K3P-201ENST00000531655 943 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AC023310.2-201ENST00000553844 547 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AL355076.3-201ENST00000555838 587 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 OR4N3P-201ENST00000559395 818 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 FAM30C-201ENST00000561158 410 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AP003115.1-201ENST00000569849 463 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 RN7SL667P-201ENST00000582817 298 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AC025287.2-201ENST00000621911 668 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AC135068.4-201ENST00000622949 925 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AL353898.2-201ENST00000623000 255 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AC011471.4-201ENST00000638271 216 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 LINC01616-201ENST00000561816 2280 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 DDX10P2-201ENST00000417796 2614 ntBASIC5.05□□□□□ -1.6
HLA-DQA1P01909 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DQA1P01909 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms