Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 ASNSP6-201ENST00000592770 1618 ntBASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 SOD1P1-201ENST00000407803 440 ntBASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 NFU1P1-201ENST00000413128 774 ntBASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 CENPN-204ENST00000428963 971 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 MYL6P3-201ENST00000436904 432 ntBASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 SRP68P2-201ENST00000456184 254 ntBASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 AC010878.1-201ENST00000456500 1047 ntBASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 AC128716.1-201ENST00000475129 166 ntBASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 RN7SL776P-201ENST00000493390 268 ntBASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 DCAF13P2-201ENST00000514188 555 ntBASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 AP001994.1-201ENST00000527539 826 ntBASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 ASB8-207ENST00000536953 923 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 AC016144.1-201ENST00000548175 1087 ntBASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 AC011193.2-201ENST00000582638 367 ntBASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 AC012511.1-201ENST00000608140 449 ntBASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 AL121782.1-201ENST00000611242 413 ntBASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 AC012254.5-201ENST00000623573 478 ntBASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 BRD7P1-201ENST00000557705 1915 ntBASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 CDY19P-201ENST00000411668 1613 ntBASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 CDY18P-201ENST00000438294 1609 ntBASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AC007159.1-201ENST00000566529 4706 ntBASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AL139384.2-201ENST00000613809 3590 ntBASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AL359633.1-201ENST00000421403 310 ntBASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 SNRPEP5-201ENST00000425442 278 ntBASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 RPL14P5-201ENST00000436474 730 ntBASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AL929410.2-201ENST00000451170 189 ntBASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AP000805.1-201ENST00000471604 784 ntBASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AC025271.1-201ENST00000485045 429 ntBASIC5.16□□□□□ -1.58
HLA-DRB4X5D2U9 AC096743.1-201ENST00000485172 319 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms