Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 CD101-201ENST00000256652 3283 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 MR1-205ENST00000434571 7479 ntTSL 5 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 RNA5SP250-201ENST00000362534 119 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 RNY4P24-201ENST00000362735 96 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 U3.4-201ENST00000363352 213 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AC073621.2-201ENST00000381380 1024 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 RNU6-1042P-201ENST00000384204 107 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 APLF-202ENST00000394342 1182 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 FGF7P8-201ENST00000402994 292 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 VN2R10P-201ENST00000411871 853 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 SYNE1-AS1-201ENST00000412161 553 ntTSL 2 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AL160290.1-201ENST00000415509 416 ntTSL 3 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 YWHAZP5-201ENST00000419975 730 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 TRIM60P10Y-201ENST00000425589 751 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 BX119321.1-201ENST00000428912 797 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 FABP5P10-201ENST00000435729 408 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AC092431.2-201ENST00000441658 318 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AC010099.2-201ENST00000443177 373 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 RPSAP76-201ENST00000444599 853 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 CTSLP6-201ENST00000458273 1002 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AC026348.1-201ENST00000462549 1053 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 RPS4XP6-201ENST00000477670 797 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AC008410.1-201ENST00000483777 339 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 RPL22-207ENST00000484532 449 ntTSL 2 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 NIPA2P2-201ENST00000496376 1083 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 MTCYBP17-201ENST00000503579 789 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 NPM1P21-201ENST00000513394 762 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AP001804.1-201ENST00000526868 919 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AP000873.3-201ENST00000531869 766 ntTSL 5 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AL023284.4-201ENST00000564248 374 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 ROCK1P1-201ENST00000573767 549 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AC005552.1-201ENST00000577556 662 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AC015688.2-201ENST00000584523 262 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 ZNF559-ZNF177-205ENST00000602856 419 ntTSL 5 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AC009994.1-201ENST00000606889 253 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AP002345.2-201ENST00000609961 904 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AC006338.1-201ENST00000618453 749 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 OR1S1-201ENST00000624470 978 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AC073488.11-201ENST00000633298 754 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AC073869.7-201ENST00000640874 297 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 HCG18-244ENST00000602516 2890 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 CABLES1-202ENST00000400473 1544 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 AC017002.4-201ENST00000604721 1525 ntBASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 TRIM43-201ENST00000272395 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 PHACTR2-AS1-201ENST00000450575 1699 ntTSL 5 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 SP110-215ENST00000540870 2032 ntTSL 2 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 CLDN8-201ENST00000399899 2068 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 IL5RA-202ENST00000311981 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 SKAP1-201ENST00000336915 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 CELF1-202ENST00000358597 2108 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 FTH1P3-201ENST00000394290 584 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 NUS1P4-201ENST00000401550 585 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms