Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 NF1P8-201ENST00000415351 1461 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 OR2A3P-202ENST00000641249 1776 ntBASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDK5RAP1Q96SZ6 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AC068733.2-201ENST00000605434 1418 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 ZNF812P-201ENST00000457674 1694 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AL136520.1-201ENST00000600311 1322 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AC107980.1-201ENST00000558671 3355 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AC024341.1-201ENST00000526444 1552 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 MIR99A-201ENST00000384906 81 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 YWHAZP5-201ENST00000419975 730 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AC245047.1-201ENST00000433276 873 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AC092647.3-201ENST00000443044 633 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AC092106.1-201ENST00000444291 373 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AC009244.1-201ENST00000450566 258 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AL445669.2-201ENST00000454425 421 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 RPS3AP6-201ENST00000484430 795 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AC093325.1-201ENST00000508378 326 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 RN7SKP11-201ENST00000517018 287 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 SCARNA1-201ENST00000517138 166 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AP001636.2-201ENST00000525517 696 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AL135978.1-201ENST00000553618 1266 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AC023827.2-201ENST00000566880 1061 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AC005412.1-201ENST00000580812 1049 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 RPS27AP19-201ENST00000597285 458 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AC130448.2-201ENST00000624082 374 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 AC073263.3-201ENST00000624449 858 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 MTCO1P46-201ENST00000451639 1491 ntBASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDK5RAP1Q96SZ6 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 OR4C1P-202ENST00000641065 1569 ntBASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 AL590762.1-201ENST00000391782 432 ntBASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 AC007365.2-201ENST00000428806 458 ntBASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 AC027124.1-201ENST00000440852 466 ntBASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 MTND1P31-201ENST00000449206 961 ntBASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 RPS26P11-201ENST00000463445 348 ntBASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 RPL34P34-201ENST00000465389 354 ntBASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 RPS26P6-201ENST00000475156 348 ntBASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 MTCO1P55-201ENST00000489829 745 ntBASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 AC009879.1-201ENST00000520029 839 ntBASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 OR7E154P-201ENST00000525174 932 ntBASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 MTND1P24-201ENST00000552175 861 ntBASIC7.34□□□□□ -1.23
CDK5RAP1Q96SZ6 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms