Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 BCAT1-206ENST00000539780 1360 ntTSL 2 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 IGSF22-205ENST00000513874 4284 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 AP002001.2-201ENST00000529025 1469 ntBASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 SP110-215ENST00000540870 2032 ntTSL 2 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 KIF23-202ENST00000352331 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 ERCC6-208ENST00000515869 3439 ntTSL 2 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 HEATR6-203ENST00000585976 3288 ntTSL 5 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 HEATR6-212ENST00000613428 3287 ntTSL 5 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 THG1L-201ENST00000231198 3107 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 NVL-202ENST00000340871 2431 ntTSL 2 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AL158206.1-201ENST00000563205 1965 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AC005538.2-201ENST00000623215 1864 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 DYDC2-207ENST00000616870 1723 ntAPPRIS P3 TSL 3 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 F11-AS1-202ENST00000508110 1512 ntTSL 5 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 CAMK2D-214ENST00000515496 1533 ntTSL 5 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AP000705.2-201ENST00000433524 1386 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 STMND1-203ENST00000536551 1322 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 MIR425-201ENST00000362162 87 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 RNA5SP426-201ENST00000362901 121 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 RNU6-560P-201ENST00000364007 108 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 RN7SKP226-201ENST00000364912 300 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 RNU5A-6P-201ENST00000384136 116 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 Y_RNA.582-201ENST00000391023 95 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AL133406.1-201ENST00000404904 747 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 RPL21P107-201ENST00000411449 460 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 RPS7P13-201ENST00000413955 498 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AC096644.3-201ENST00000416788 338 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AC027644.1-201ENST00000419595 298 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AL590094.1-203ENST00000435649 828 ntTSL 5 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 ASS1P4-201ENST00000439462 1234 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AC093019.1-201ENST00000443135 252 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AC010099.2-201ENST00000443177 373 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 MARK2P14-201ENST00000449657 628 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 RPL21P134-201ENST00000453468 483 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 RPL22-207ENST00000484532 449 ntTSL 2 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AL358832.1-201ENST00000497800 389 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AC244505.1-201ENST00000502642 307 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AC147055.4-201ENST00000504399 745 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 ST3GAL4-219ENST00000534457 987 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AC018653.2-201ENST00000540190 238 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AC087286.4-201ENST00000558757 746 ntTSL 3 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AC012182.1-201ENST00000570133 895 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 MIR4528-201ENST00000577763 90 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 SRP68P1-201ENST00000584247 269 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 CDC37L1-AS1-201ENST00000607997 463 ntTSL 5 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 RBM22P4-201ENST00000613117 1240 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 CARMN-212ENST00000614896 536 ntTSL 5 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AC024559.2-202ENST00000615240 529 ntTSL 5 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 ZNHIT3-204ENST00000617429 951 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 Metazoa_SRP.115-201ENST00000619303 284 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 ZNF410-225ENST00000639051 936 ntTSL 5 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 FAM157B-203ENST00000639350 358 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 CELF1-202ENST00000358597 2108 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 AC012513.3-201ENST00000623250 2116 ntBASIC8.92□□□□□ -0.98
SCUBE3Q8IX30 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SCUBE3Q8IX30 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SCUBE3Q8IX30 ZNF562-208ENST00000590155 1712 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
SCUBE3Q8IX30 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
SCUBE3Q8IX30 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC8.91□□□□□ -0.98
SCUBE3Q8IX30 CEP68-205ENST00000537589 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
SCUBE3Q8IX30 CABLES1-202ENST00000400473 1544 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
SCUBE3Q8IX30 NVL-212ENST00000469968 2510 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
SCUBE3Q8IX30 AC005539.1-201ENST00000443768 1479 ntBASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms