Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMGA1P17096 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.94□□□□□ -1.3
HMGA1P17096 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.94□□□□□ -1.3
HMGA1P17096 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.94□□□□□ -1.3
HMGA1P17096 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.94□□□□□ -1.3
HMGA1P17096 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.94□□□□□ -1.3
HMGA1P17096 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMGA1P17096 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.94□□□□□ -1.3
HMGA1P17096 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.94□□□□□ -1.3
HMGA1P17096 AC010333.3-201ENST00000615100 402 ntBASIC6.94□□□□□ -1.3
HMGA1P17096 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.94□□□□□ -1.3
HMGA1P17096 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
HMGA1P17096 AL591926.1-201ENST00000620542 217 ntBASIC6.94□□□□□ -1.3
HMGA1P17096 AL132796.3-201ENST00000624703 900 ntBASIC6.94□□□□□ -1.3
HMGA1P17096 AC111152.1-202ENST00000635848 339 ntBASIC6.94□□□□□ -1.3
HMGA1P17096 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMGA1P17096 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.94□□□□□ -1.3
HMGA1P17096 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMGA1P17096 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.94□□□□□ -1.3
HMGA1P17096 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.94□□□□□ -1.3
HMGA1P17096 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
HMGA1P17096 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
HMGA1P17096 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMGA1P17096 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC6.94□□□□□ -1.3
HMGA1P17096 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGA1P17096 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC6.94□□□□□ -1.3
HMGA1P17096 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.94□□□□□ -1.3
HMGA1P17096 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMGA1P17096 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
HMGA1P17096 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMGA1P17096 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC6.93□□□□□ -1.3
HMGA1P17096 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
HMGA1P17096 MFSD8-217ENST00000641178 4374 ntBASIC6.93□□□□□ -1.3
HMGA1P17096 AC122713.2-201ENST00000624942 3335 ntBASIC6.93□□□□□ -1.3
HMGA1P17096 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
HMGA1P17096 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.93□□□□□ -1.3
HMGA1P17096 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.93□□□□□ -1.3
HMGA1P17096 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.93□□□□□ -1.3
HMGA1P17096 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMGA1P17096 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMGA1P17096 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.93□□□□□ -1.3
HMGA1P17096 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HMGA1P17096 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HMGA1P17096 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HMGA1P17096 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HMGA1P17096 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMGA1P17096 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HMGA1P17096 PRELID1P1-201ENST00000403549 660 ntBASIC6.93□□□□□ -1.3
HMGA1P17096 VDAC1P2-201ENST00000423609 850 ntBASIC6.93□□□□□ -1.3
HMGA1P17096 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.93□□□□□ -1.3
HMGA1P17096 AC245452.2-201ENST00000435222 392 ntBASIC6.93□□□□□ -1.3
HMGA1P17096 PCNPP2-201ENST00000441651 455 ntBASIC6.93□□□□□ -1.3
HMGA1P17096 AC104339.1-201ENST00000465478 348 ntBASIC6.93□□□□□ -1.3
HMGA1P17096 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.93□□□□□ -1.3
HMGA1P17096 AC018645.1-201ENST00000505003 109 ntBASIC6.93□□□□□ -1.3
HMGA1P17096 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.93□□□□□ -1.3
HMGA1P17096 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.93□□□□□ -1.3
HMGA1P17096 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.93□□□□□ -1.3
HMGA1P17096 AC009729.1-201ENST00000548873 1133 ntBASIC6.93□□□□□ -1.3
HMGA1P17096 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMGA1P17096 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.93□□□□□ -1.3
HMGA1P17096 AC004805.3-201ENST00000603178 310 ntBASIC6.93□□□□□ -1.3
HMGA1P17096 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.93□□□□□ -1.3
HMGA1P17096 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.93□□□□□ -1.3
HMGA1P17096 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.93□□□□□ -1.3
HMGA1P17096 MIR6806-201ENST00000622141 64 ntBASIC6.93□□□□□ -1.3
HMGA1P17096 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.93□□□□□ -1.3
HMGA1P17096 AL683826.1-201ENST00000624104 627 ntBASIC6.93□□□□□ -1.3
HMGA1P17096 AC018692.2-201ENST00000624130 348 ntBASIC6.93□□□□□ -1.3
HMGA1P17096 AC010325.3-201ENST00000641084 394 ntBASIC6.93□□□□□ -1.3
HMGA1P17096 AC131649.2-201ENST00000624925 4439 ntBASIC6.93□□□□□ -1.3
HMGA1P17096 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMGA1P17096 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC6.93□□□□□ -1.3
HMGA1P17096 HNRNPA1P54-201ENST00000411857 9714 ntBASIC6.93□□□□□ -1.3
HMGA1P17096 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMGA1P17096 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
HMGA1P17096 AC005702.3-201ENST00000585345 1447 ntBASIC6.93□□□□□ -1.3
HMGA1P17096 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGA1P17096 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.92□□□□□ -1.3
HMGA1P17096 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
HMGA1P17096 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGA1P17096 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMGA1P17096 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.92□□□□□ -1.3
HMGA1P17096 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGA1P17096 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.92□□□□□ -1.3
HMGA1P17096 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMGA1P17096 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.92□□□□□ -1.3
HMGA1P17096 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMGA1P17096 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMGA1P17096 RNA5SP77-201ENST00000365394 120 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 CXADRP1-201ENST00000398098 1095 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 MIR1275-201ENST00000408770 80 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 RNA5SP198-201ENST00000410376 127 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 AL359092.1-201ENST00000417156 265 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 AL360013.1-201ENST00000419031 858 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 AL139158.1-201ENST00000424719 340 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 AC083862.1-201ENST00000427378 1242 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.92□□□□□ -1.3
HMGA1P17096 AL354893.1-201ENST00000433735 348 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms