Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 PHBP12-201ENST00000453979 811 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 NUTF2P4-201ENST00000458353 381 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 VAMP7-203ENST00000460621 658 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC022701.1-201ENST00000462935 622 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 LINC00544-202ENST00000481738 575 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC083841.1-201ENST00000523657 670 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AP003385.2-201ENST00000524910 973 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC069235.1-202ENST00000545535 540 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC090022.1-201ENST00000546569 311 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC233290.2-201ENST00000552852 390 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC044860.3-201ENST00000559957 368 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC106730.2-201ENST00000566641 540 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC098850.2-201ENST00000578710 686 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 RPL36-204ENST00000579446 452 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 RN7SL391P-201ENST00000582559 284 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC060766.7-201ENST00000587012 1212 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 RPL12P41-201ENST00000599500 498 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 ZSCAN30-210ENST00000601405 510 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 SRD5A3-AS1-212ENST00000601433 754 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC027334.1-201ENST00000603257 310 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 RPS28P1-201ENST00000604589 187 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 MARK3P1-201ENST00000604796 643 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC004890.3-201ENST00000605566 1095 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC084876.1-201ENST00000612793 641 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AL031772.1-216ENST00000619494 697 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AP000577.1-201ENST00000624366 878 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC011471.4-201ENST00000638271 216 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 FBXO47-201ENST00000378079 2302 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC087045.3-201ENST00000623046 2468 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 CASC19-221ENST00000641309 1382 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 QRSL1P3-201ENST00000552666 1316 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 RPL32-201ENST00000273223 567 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 TMCO5A-201ENST00000319669 1274 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 RN7SKP128-201ENST00000364270 303 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 SNORA73A-201ENST00000364938 206 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 SNORA48B-201ENST00000390912 135 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 TPM3P6-201ENST00000391998 742 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AL138807.1-201ENST00000400354 459 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 NMNAT1-202ENST00000403197 1094 ntTSL 2 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AL049697.3-201ENST00000406493 982 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 RN7SKP169-201ENST00000411124 291 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 ITPKB-IT1-201ENST00000412918 746 ntTSL 2 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 CYCSP52-201ENST00000422857 310 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 FDPSP1-201ENST00000424976 1071 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 SNX18P3-201ENST00000424993 835 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC006378.1-201ENST00000426193 563 ntTSL 4 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 RNF11P2-201ENST00000427702 440 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AL358176.4-201ENST00000428891 675 ntTSL 2 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 IGLV3-4-201ENST00000432300 244 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 RPL34P6-201ENST00000432390 345 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 RPSAP53-201ENST00000433498 862 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC092447.2-201ENST00000435487 669 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms