Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 NIFKP4-201ENST00000567275 1192 ntBASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 MIR6885-201ENST00000612241 66 ntBASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 CCDC150P1-201ENST00000537123 2215 ntBASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 AL590762.1-201ENST00000391782 432 ntBASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 AL034417.1-201ENST00000399343 800 ntBASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 HMGN1P6-201ENST00000438508 291 ntBASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 E2F6P3-201ENST00000441743 743 ntBASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 RPS10P20-201ENST00000494130 463 ntBASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 AC139713.1-202ENST00000512366 460 ntBASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 NXPE2P1-201ENST00000543705 726 ntBASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 RPS4XP21-201ENST00000603814 750 ntBASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 AC139493.1-201ENST00000604368 397 ntBASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC8.11□□□□□ -1.11
CLIP2Q9UDT6 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 AL353133.1-201ENST00000407695 401 ntBASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 MIR1266-201ENST00000408125 84 ntBASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 PTPN2P1-201ENST00000423212 1072 ntBASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 ETF1P1-206ENST00000427296 984 ntBASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 RN7SKP198-201ENST00000459286 306 ntBASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 IGLVVII-41-1-201ENST00000518405 151 ntBASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 AC024267.2-201ENST00000582737 417 ntBASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 AC017037.4-201ENST00000624526 826 ntBASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 AC027559.1-201ENST00000636288 271 ntBASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 AC067942.1-201ENST00000488045 1493 ntBASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 DLEU2L-201ENST00000371086 3555 ntBASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 OR2AH1P-202ENST00000641232 2744 ntBASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 NPL-212ENST00000614468 2376 ntTSL 5 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC8.1□□□□□ -1.11
CLIP2Q9UDT6 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms