Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC006335.3-201ENST00000613408 292 ntBASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 BX005195.1-201ENST00000618097 1198 ntBASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
AMBRA1Q9C0C7 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
AMBRA1Q9C0C7 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
AMBRA1Q9C0C7 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
AMBRA1Q9C0C7 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC6.65□□□□□ -1.35
AMBRA1Q9C0C7 EEF1A1P22-201ENST00000559385 1380 ntBASIC6.65□□□□□ -1.35
AMBRA1Q9C0C7 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
AMBRA1Q9C0C7 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.65□□□□□ -1.35
AMBRA1Q9C0C7 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.65□□□□□ -1.35
AMBRA1Q9C0C7 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.65□□□□□ -1.35
AMBRA1Q9C0C7 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.65□□□□□ -1.35
AMBRA1Q9C0C7 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.35
AMBRA1Q9C0C7 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.65□□□□□ -1.35
AMBRA1Q9C0C7 VEZF1P1-201ENST00000423931 1541 ntBASIC6.65□□□□□ -1.35
AMBRA1Q9C0C7 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
AMBRA1Q9C0C7 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
AMBRA1Q9C0C7 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.65□□□□□ -1.35
AMBRA1Q9C0C7 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
AMBRA1Q9C0C7 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
AMBRA1Q9C0C7 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 MIR7-1-201ENST00000384871 110 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 RNU6-1055P-201ENST00000391085 107 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AL357078.2-201ENST00000416486 427 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 RPL17P17-201ENST00000419491 557 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 HMGN1P6-201ENST00000438508 291 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AC239800.1-201ENST00000442049 719 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 RNF2P1-201ENST00000442955 1010 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AL034399.1-201ENST00000451535 380 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 PSPC1P2-201ENST00000455130 225 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AC004692.1-201ENST00000455430 424 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 EIF2S2P5-201ENST00000457635 968 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 HAUS1P1-201ENST00000505275 832 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 SCARNA1-201ENST00000517138 166 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AC130364.2-201ENST00000528639 604 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 COX6CP11-201ENST00000555293 229 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AC012414.2-201ENST00000559474 187 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AL512430.4-201ENST00000603085 613 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AC016597.2-201ENST00000613256 341 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AC006927.4-201ENST00000639187 543 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AC104837.1-201ENST00000444644 1587 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 AC012213.2-201ENST00000562917 4597 ntBASIC6.64□□□□□ -1.35
AMBRA1Q9C0C7 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
AMBRA1Q9C0C7 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms