Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
CCNA1P78396 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.81□□□□□ -1.16
CCNA1P78396 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CCNA1P78396 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CCNA1P78396 LINC01613-201ENST00000561476 2780 ntBASIC7.81□□□□□ -1.16
CCNA1P78396 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CCNA1P78396 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CCNA1P78396 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC7.8□□□□□ -1.16
CCNA1P78396 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.8□□□□□ -1.16
CCNA1P78396 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
CCNA1P78396 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 AC011008.2-201ENST00000624866 3352 ntBASIC7.8□□□□□ -1.16
CCNA1P78396 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 OR7A2P-201ENST00000304105 930 ntBASIC7.8□□□□□ -1.16
CCNA1P78396 RNA5SP485-201ENST00000365053 119 ntBASIC7.8□□□□□ -1.16
CCNA1P78396 CYCSP17-201ENST00000407870 315 ntBASIC7.8□□□□□ -1.16
CCNA1P78396 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 AL360013.1-201ENST00000419031 858 ntBASIC7.8□□□□□ -1.16
CCNA1P78396 RPS10P18-201ENST00000442662 495 ntBASIC7.8□□□□□ -1.16
CCNA1P78396 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.8□□□□□ -1.16
CCNA1P78396 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.8□□□□□ -1.16
CCNA1P78396 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.8□□□□□ -1.16
CCNA1P78396 AC016724.1-201ENST00000453215 421 ntBASIC7.8□□□□□ -1.16
CCNA1P78396 SETP4-201ENST00000455717 868 ntBASIC7.8□□□□□ -1.16
CCNA1P78396 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.8□□□□□ -1.16
CCNA1P78396 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 RPL7AP23-201ENST00000482625 776 ntBASIC7.8□□□□□ -1.16
CCNA1P78396 RPL12P7-201ENST00000493832 494 ntBASIC7.8□□□□□ -1.16
CCNA1P78396 AC117500.1-201ENST00000497352 755 ntBASIC7.8□□□□□ -1.16
CCNA1P78396 AL390198.2-201ENST00000510553 222 ntBASIC7.8□□□□□ -1.16
CCNA1P78396 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.8□□□□□ -1.16
CCNA1P78396 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.8□□□□□ -1.16
CCNA1P78396 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
CCNA1P78396 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC7.8□□□□□ -1.16
CCNA1P78396 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.8□□□□□ -1.16
CCNA1P78396 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC7.8□□□□□ -1.16
CCNA1P78396 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
CCNA1P78396 AC063977.7-201ENST00000594454 337 ntBASIC7.8□□□□□ -1.16
CCNA1P78396 AC114477.1-201ENST00000605097 605 ntBASIC7.8□□□□□ -1.16
CCNA1P78396 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.8□□□□□ -1.16
CCNA1P78396 MIR6071-201ENST00000616741 78 ntBASIC7.8□□□□□ -1.16
CCNA1P78396 AC111152.1-202ENST00000635848 339 ntBASIC7.8□□□□□ -1.16
CCNA1P78396 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.8□□□□□ -1.16
CCNA1P78396 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.8□□□□□ -1.16
CCNA1P78396 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.8□□□□□ -1.16
CCNA1P78396 SMG1P5-202ENST00000529428 4219 ntBASIC7.8□□□□□ -1.16
CCNA1P78396 SMG1P2-201ENST00000566127 4221 ntBASIC7.8□□□□□ -1.16
CCNA1P78396 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.8□□□□□ -1.16
CCNA1P78396 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCNA1P78396 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
CCNA1P78396 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCNA1P78396 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.79□□□□□ -1.16
CCNA1P78396 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCNA1P78396 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCNA1P78396 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCNA1P78396 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCNA1P78396 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
CCNA1P78396 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
CCNA1P78396 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCNA1P78396 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCNA1P78396 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCNA1P78396 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
CCNA1P78396 RNA5SP512-201ENST00000364550 120 ntBASIC7.79□□□□□ -1.16
CCNA1P78396 NRIR-201ENST00000366140 799 ntTSL 3 BASIC7.79□□□□□ -1.16
CCNA1P78396 AL391419.1-201ENST00000398901 1275 ntBASIC7.79□□□□□ -1.16
CCNA1P78396 RPL12P23-201ENST00000405880 490 ntBASIC7.79□□□□□ -1.16
CCNA1P78396 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.79□□□□□ -1.16
CCNA1P78396 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.79□□□□□ -1.16
CCNA1P78396 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCNA1P78396 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.79□□□□□ -1.16
CCNA1P78396 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCNA1P78396 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.79□□□□□ -1.16
CCNA1P78396 AC093870.1-201ENST00000506837 213 ntBASIC7.79□□□□□ -1.16
CCNA1P78396 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC7.79□□□□□ -1.16
CCNA1P78396 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.79□□□□□ -1.16
CCNA1P78396 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.79□□□□□ -1.16
CCNA1P78396 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCNA1P78396 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCNA1P78396 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.79□□□□□ -1.16
CCNA1P78396 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC7.79□□□□□ -1.16
CCNA1P78396 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.79□□□□□ -1.16
CCNA1P78396 AL035410.2-201ENST00000604963 864 ntBASIC7.79□□□□□ -1.16
CCNA1P78396 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC7.79□□□□□ -1.16
CCNA1P78396 AL589743.6-201ENST00000611025 117 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms