Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.76□□□□□ -1.49
CDX1P47902 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CDX1P47902 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDX1P47902 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC5.75□□□□□ -1.49
CDX1P47902 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CDX1P47902 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC5.75□□□□□ -1.49
CDX1P47902 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDX1P47902 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDX1P47902 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC5.75□□□□□ -1.49
CDX1P47902 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDX1P47902 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDX1P47902 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDX1P47902 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDX1P47902 MED6-212ENST00000615788 1700 ntTSL 5 BASIC5.75□□□□□ -1.49
CDX1P47902 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDX1P47902 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDX1P47902 RPL10P16-201ENST00000325000 645 ntBASIC5.75□□□□□ -1.49
CDX1P47902 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDX1P47902 OR11H13P-201ENST00000359695 979 ntBASIC5.75□□□□□ -1.49
CDX1P47902 RNU6-316P-201ENST00000391027 107 ntBASIC5.75□□□□□ -1.49
CDX1P47902 RPL24P7-201ENST00000399435 453 ntBASIC5.75□□□□□ -1.49
CDX1P47902 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CDX1P47902 NPM1P38-201ENST00000403835 865 ntBASIC5.75□□□□□ -1.49
CDX1P47902 AC009413.1-201ENST00000414823 399 ntBASIC5.75□□□□□ -1.49
CDX1P47902 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDX1P47902 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDX1P47902 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.75□□□□□ -1.49
CDX1P47902 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDX1P47902 PRKAR1AP1-201ENST00000441422 1162 ntBASIC5.75□□□□□ -1.49
CDX1P47902 DNAJC19P5-201ENST00000443295 316 ntBASIC5.75□□□□□ -1.49
CDX1P47902 TVP23CP1-201ENST00000450317 639 ntBASIC5.75□□□□□ -1.49
CDX1P47902 OR52Y1P-201ENST00000452418 828 ntBASIC5.75□□□□□ -1.49
CDX1P47902 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC5.75□□□□□ -1.49
CDX1P47902 MTCYBP14-201ENST00000457471 715 ntBASIC5.75□□□□□ -1.49
CDX1P47902 RN7SL152P-201ENST00000484176 298 ntBASIC5.75□□□□□ -1.49
CDX1P47902 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC5.75□□□□□ -1.49
CDX1P47902 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC5.75□□□□□ -1.49
CDX1P47902 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC5.75□□□□□ -1.49
CDX1P47902 IGKV2-29-201ENST00000521304 372 ntBASIC5.75□□□□□ -1.49
CDX1P47902 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC5.75□□□□□ -1.49
CDX1P47902 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC5.75□□□□□ -1.49
CDX1P47902 SAA3P-201ENST00000533267 365 ntBASIC5.75□□□□□ -1.49
CDX1P47902 AC068790.1-201ENST00000536166 355 ntBASIC5.75□□□□□ -1.49
CDX1P47902 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.75□□□□□ -1.49
CDX1P47902 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC5.75□□□□□ -1.49
CDX1P47902 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC5.75□□□□□ -1.49
CDX1P47902 AL589765.5-201ENST00000596133 515 ntBASIC5.75□□□□□ -1.49
CDX1P47902 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC5.75□□□□□ -1.49
CDX1P47902 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.75□□□□□ -1.49
CDX1P47902 AC009237.12-201ENST00000604755 742 ntBASIC5.75□□□□□ -1.49
CDX1P47902 FXYD6P1-201ENST00000604857 285 ntBASIC5.75□□□□□ -1.49
CDX1P47902 RN7SL778P-201ENST00000607160 297 ntBASIC5.75□□□□□ -1.49
CDX1P47902 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC5.75□□□□□ -1.49
CDX1P47902 AC093909.6-201ENST00000624757 775 ntBASIC5.75□□□□□ -1.49
CDX1P47902 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDX1P47902 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDX1P47902 FO082842.1-201ENST00000423552 1370 ntBASIC5.75□□□□□ -1.49
CDX1P47902 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CDX1P47902 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.75□□□□□ -1.49
CDX1P47902 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDX1P47902 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CDX1P47902 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.75□□□□□ -1.49
CDX1P47902 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.75□□□□□ -1.49
CDX1P47902 SAMMSON-203ENST00000641005 2168 ntBASIC5.74□□□□□ -1.49
CDX1P47902 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CDX1P47902 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.74□□□□□ -1.49
CDX1P47902 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.74□□□□□ -1.49
CDX1P47902 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.74□□□□□ -1.49
CDX1P47902 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.74□□□□□ -1.49
CDX1P47902 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CDX1P47902 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 RBBP4P4-201ENST00000398588 1289 ntBASIC5.74□□□□□ -1.49
CDX1P47902 TYMSP1-201ENST00000407851 869 ntBASIC5.74□□□□□ -1.49
CDX1P47902 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 CENPN-204ENST00000428963 971 ntTSL 2 BASIC5.74□□□□□ -1.49
CDX1P47902 EEF1A1P27-201ENST00000429983 1135 ntBASIC5.74□□□□□ -1.49
CDX1P47902 AC005040.1-201ENST00000437783 482 ntBASIC5.74□□□□□ -1.49
CDX1P47902 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC5.74□□□□□ -1.49
CDX1P47902 AC073072.2-201ENST00000447425 348 ntBASIC5.74□□□□□ -1.49
CDX1P47902 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC5.74□□□□□ -1.49
CDX1P47902 IGKV1OR2-2-201ENST00000451163 355 ntBASIC5.74□□□□□ -1.49
CDX1P47902 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.74□□□□□ -1.49
CDX1P47902 AL928654.1-201ENST00000476081 354 ntBASIC5.74□□□□□ -1.49
CDX1P47902 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.74□□□□□ -1.49
CDX1P47902 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.74□□□□□ -1.49
CDX1P47902 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDX1P47902 RN7SKP248-201ENST00000516278 305 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms