Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.36□□□□□ -1.39
RFC3P40938 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.36□□□□□ -1.39
RFC3P40938 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.36□□□□□ -1.39
RFC3P40938 CYCSP1-201ENST00000604815 315 ntBASIC6.36□□□□□ -1.39
RFC3P40938 MIR6885-201ENST00000612241 66 ntBASIC6.36□□□□□ -1.39
RFC3P40938 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.36□□□□□ -1.39
RFC3P40938 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.36□□□□□ -1.39
RFC3P40938 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.36□□□□□ -1.39
RFC3P40938 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RFC3P40938 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RFC3P40938 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RFC3P40938 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
RFC3P40938 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.36□□□□□ -1.39
RFC3P40938 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RFC3P40938 AL121949.2-201ENST00000403446 1548 ntBASIC6.35□□□□□ -1.39
RFC3P40938 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.35□□□□□ -1.39
RFC3P40938 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RFC3P40938 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.35□□□□□ -1.39
RFC3P40938 AC092646.2-201ENST00000431242 2095 ntBASIC6.35□□□□□ -1.39
RFC3P40938 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RFC3P40938 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.35□□□□□ -1.39
RFC3P40938 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RFC3P40938 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RFC3P40938 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RFC3P40938 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
RFC3P40938 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RFC3P40938 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
RFC3P40938 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
RFC3P40938 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RFC3P40938 RNU6-1017P-201ENST00000363613 106 ntBASIC6.35□□□□□ -1.39
RFC3P40938 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.35□□□□□ -1.39
RFC3P40938 AL034417.1-201ENST00000399343 800 ntBASIC6.35□□□□□ -1.39
RFC3P40938 AL359715.1-201ENST00000404330 555 ntBASIC6.35□□□□□ -1.39
RFC3P40938 AL079341.1-201ENST00000404701 1207 ntBASIC6.35□□□□□ -1.39
RFC3P40938 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.35□□□□□ -1.39
RFC3P40938 AL445193.2-201ENST00000419596 620 ntTSL 3 BASIC6.35□□□□□ -1.39
RFC3P40938 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RFC3P40938 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.35□□□□□ -1.39
RFC3P40938 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.35□□□□□ -1.39
RFC3P40938 MORF4L1P5-201ENST00000433352 961 ntBASIC6.35□□□□□ -1.39
RFC3P40938 AC114755.4-201ENST00000439114 443 ntBASIC6.35□□□□□ -1.39
RFC3P40938 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC6.35□□□□□ -1.39
RFC3P40938 WDR82P2-201ENST00000444540 928 ntBASIC6.35□□□□□ -1.39
RFC3P40938 RPL34P34-201ENST00000465389 354 ntBASIC6.35□□□□□ -1.39
RFC3P40938 EIF4E2P2-201ENST00000492033 736 ntBASIC6.35□□□□□ -1.39
RFC3P40938 AC146944.3-201ENST00000509969 371 ntBASIC6.35□□□□□ -1.39
RFC3P40938 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.35□□□□□ -1.39
RFC3P40938 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.35□□□□□ -1.39
RFC3P40938 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.35□□□□□ -1.39
RFC3P40938 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.35□□□□□ -1.39
RFC3P40938 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
RFC3P40938 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.35□□□□□ -1.39
RFC3P40938 AC026458.1-201ENST00000564330 438 ntBASIC6.35□□□□□ -1.39
RFC3P40938 AC091304.4-201ENST00000565703 620 ntBASIC6.35□□□□□ -1.39
RFC3P40938 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.35□□□□□ -1.39
RFC3P40938 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.35□□□□□ -1.39
RFC3P40938 AP005212.3-201ENST00000619964 528 ntBASIC6.35□□□□□ -1.39
RFC3P40938 AC073857.1-201ENST00000625082 1054 ntBASIC6.35□□□□□ -1.39
RFC3P40938 AC027559.1-201ENST00000636288 271 ntBASIC6.35□□□□□ -1.39
RFC3P40938 AC007603.3-201ENST00000636915 979 ntBASIC6.35□□□□□ -1.39
RFC3P40938 AC011471.4-201ENST00000638271 216 ntBASIC6.35□□□□□ -1.39
RFC3P40938 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.35□□□□□ -1.39
RFC3P40938 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RFC3P40938 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.35□□□□□ -1.39
RFC3P40938 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC6.35□□□□□ -1.39
RFC3P40938 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RFC3P40938 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.35□□□□□ -1.39
RFC3P40938 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.35□□□□□ -1.39
RFC3P40938 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RFC3P40938 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RFC3P40938 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
RFC3P40938 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RFC3P40938 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.35□□□□□ -1.39
RFC3P40938 ATP5BP1-201ENST00000411980 1574 ntBASIC6.35□□□□□ -1.39
RFC3P40938 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
RFC3P40938 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RFC3P40938 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RFC3P40938 CYP2G2P-201ENST00000594920 1485 ntBASIC6.34□□□□□ -1.39
RFC3P40938 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.34□□□□□ -1.39
RFC3P40938 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RFC3P40938 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
RFC3P40938 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.34□□□□□ -1.39
RFC3P40938 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RFC3P40938 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.34□□□□□ -1.39
RFC3P40938 SNX18P3-202ENST00000565670 1750 ntBASIC6.34□□□□□ -1.39
RFC3P40938 AP000547.3-204ENST00000588548 2523 ntBASIC6.34□□□□□ -1.39
RFC3P40938 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
RFC3P40938 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RFC3P40938 AC005034.3-201ENST00000604845 1747 ntBASIC6.34□□□□□ -1.39
RFC3P40938 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RFC3P40938 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.34□□□□□ -1.39
RFC3P40938 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.34□□□□□ -1.39
RFC3P40938 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.34□□□□□ -1.39
RFC3P40938 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RFC3P40938 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.34□□□□□ -1.39
RFC3P40938 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RFC3P40938 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.34□□□□□ -1.39
RFC3P40938 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RFC3P40938 AC008753.1-201ENST00000423096 284 ntBASIC6.34□□□□□ -1.39
RFC3P40938 PTPN2P1-201ENST00000423212 1072 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms