Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
SPTA1P02549 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SPTA1P02549 RNU1-84P-201ENST00000365447 164 ntBASIC6.27□□□□□ -1.41
SPTA1P02549 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.27□□□□□ -1.41
SPTA1P02549 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SPTA1P02549 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.27□□□□□ -1.41
SPTA1P02549 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.27□□□□□ -1.41
SPTA1P02549 H2AFZP6-201ENST00000444403 394 ntBASIC6.27□□□□□ -1.41
SPTA1P02549 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.27□□□□□ -1.41
SPTA1P02549 AC007998.1-201ENST00000474156 672 ntBASIC6.27□□□□□ -1.41
SPTA1P02549 SNX18P25-201ENST00000510539 758 ntBASIC6.27□□□□□ -1.41
SPTA1P02549 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.27□□□□□ -1.41
SPTA1P02549 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.27□□□□□ -1.41
SPTA1P02549 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.27□□□□□ -1.41
SPTA1P02549 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.27□□□□□ -1.41
SPTA1P02549 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.27□□□□□ -1.41
SPTA1P02549 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.27□□□□□ -1.41
SPTA1P02549 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.27□□□□□ -1.41
SPTA1P02549 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.27□□□□□ -1.41
SPTA1P02549 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.27□□□□□ -1.41
SPTA1P02549 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.27□□□□□ -1.41
SPTA1P02549 AC114546.4-201ENST00000624413 369 ntBASIC6.27□□□□□ -1.41
SPTA1P02549 AC127071.1-201ENST00000624997 712 ntBASIC6.27□□□□□ -1.41
SPTA1P02549 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SPTA1P02549 TMCC1P1-201ENST00000518897 1980 ntBASIC6.27□□□□□ -1.41
SPTA1P02549 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SPTA1P02549 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SPTA1P02549 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC6.26□□□□□ -1.41
SPTA1P02549 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC6.26□□□□□ -1.41
SPTA1P02549 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.26□□□□□ -1.41
SPTA1P02549 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SPTA1P02549 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
SPTA1P02549 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
SPTA1P02549 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC6.26□□□□□ -1.41
SPTA1P02549 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SPTA1P02549 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
SPTA1P02549 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SPTA1P02549 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SPTA1P02549 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
SPTA1P02549 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.26□□□□□ -1.41
SPTA1P02549 AC069154.1-201ENST00000432914 542 ntBASIC6.26□□□□□ -1.41
SPTA1P02549 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.26□□□□□ -1.41
SPTA1P02549 AMYP1-201ENST00000440059 1023 ntBASIC6.26□□□□□ -1.41
SPTA1P02549 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.26□□□□□ -1.41
SPTA1P02549 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.26□□□□□ -1.41
SPTA1P02549 AC073850.1-201ENST00000449243 255 ntBASIC6.26□□□□□ -1.41
SPTA1P02549 HLA-DPA3-207ENST00000454398 229 ntBASIC6.26□□□□□ -1.41
SPTA1P02549 MEF2AP1-201ENST00000454867 863 ntBASIC6.26□□□□□ -1.41
SPTA1P02549 H3F3AP5-201ENST00000475267 429 ntBASIC6.26□□□□□ -1.41
SPTA1P02549 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.26□□□□□ -1.41
SPTA1P02549 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SPTA1P02549 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.26□□□□□ -1.41
SPTA1P02549 AC091849.1-201ENST00000509920 121 ntBASIC6.26□□□□□ -1.41
SPTA1P02549 AC060775.1-201ENST00000518241 520 ntBASIC6.26□□□□□ -1.41
SPTA1P02549 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.26□□□□□ -1.41
SPTA1P02549 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.26□□□□□ -1.41
SPTA1P02549 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.26□□□□□ -1.41
SPTA1P02549 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.26□□□□□ -1.41
SPTA1P02549 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.26□□□□□ -1.41
SPTA1P02549 AC126335.1-201ENST00000568414 510 ntTSL 2 BASIC6.26□□□□□ -1.41
SPTA1P02549 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.26□□□□□ -1.41
SPTA1P02549 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.26□□□□□ -1.41
SPTA1P02549 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SPTA1P02549 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC6.26□□□□□ -1.41
SPTA1P02549 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.26□□□□□ -1.41
SPTA1P02549 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
SPTA1P02549 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
SPTA1P02549 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SPTA1P02549 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SPTA1P02549 OR7E25P-201ENST00000344844 931 ntBASIC6.26□□□□□ -1.41
SPTA1P02549 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SPTA1P02549 RN7SKP189-201ENST00000365042 330 ntBASIC6.26□□□□□ -1.41
SPTA1P02549 RN7SKP216-201ENST00000411050 312 ntBASIC6.26□□□□□ -1.41
SPTA1P02549 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.26□□□□□ -1.41
SPTA1P02549 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.26□□□□□ -1.41
SPTA1P02549 RPL23AP8-201ENST00000479812 475 ntBASIC6.26□□□□□ -1.41
SPTA1P02549 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SPTA1P02549 CYCSP25-201ENST00000525280 316 ntBASIC6.26□□□□□ -1.41
SPTA1P02549 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC6.26□□□□□ -1.41
SPTA1P02549 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.26□□□□□ -1.41
SPTA1P02549 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.26□□□□□ -1.41
SPTA1P02549 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.26□□□□□ -1.41
SPTA1P02549 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.26□□□□□ -1.41
SPTA1P02549 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC6.26□□□□□ -1.41
SPTA1P02549 AC004805.3-201ENST00000603178 310 ntBASIC6.26□□□□□ -1.41
SPTA1P02549 AL021707.7-201ENST00000607991 416 ntBASIC6.26□□□□□ -1.41
SPTA1P02549 AC097381.3-201ENST00000608962 462 ntBASIC6.26□□□□□ -1.41
SPTA1P02549 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.26□□□□□ -1.41
SPTA1P02549 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.26□□□□□ -1.41
SPTA1P02549 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SPTA1P02549 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SPTA1P02549 LPAL2-203ENST00000454031 2498 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.25□□□□□ -1.41
SPTA1P02549 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SPTA1P02549 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SPTA1P02549 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
SPTA1P02549 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.25□□□□□ -1.41
SPTA1P02549 OR7A2P-201ENST00000304105 930 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 RPL12P13-201ENST00000310055 497 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 RNA5SP485-201ENST00000365053 119 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms