Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
PGBD4Q96DM1 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
PGBD4Q96DM1 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.67□□□□□ -1.18
PGBD4Q96DM1 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.67□□□□□ -1.18
PGBD4Q96DM1 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC7.67□□□□□ -1.18
PGBD4Q96DM1 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 RNA5SP176-201ENST00000390956 110 ntBASIC7.66□□□□□ -1.18
PGBD4Q96DM1 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 RPL31P11-202ENST00000454082 372 ntBASIC7.66□□□□□ -1.18
PGBD4Q96DM1 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 RPS26P11-201ENST00000463445 348 ntBASIC7.66□□□□□ -1.18
PGBD4Q96DM1 RPS26P6-201ENST00000475156 348 ntBASIC7.66□□□□□ -1.18
PGBD4Q96DM1 RN7SL88P-201ENST00000480166 299 ntBASIC7.66□□□□□ -1.18
PGBD4Q96DM1 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 OR4A46P-201ENST00000527255 933 ntBASIC7.66□□□□□ -1.18
PGBD4Q96DM1 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 AC096708.2-201ENST00000577676 512 ntBASIC7.66□□□□□ -1.18
PGBD4Q96DM1 AC011458.1-201ENST00000604034 617 ntBASIC7.66□□□□□ -1.18
PGBD4Q96DM1 AC018690.1-201ENST00000608144 626 ntBASIC7.66□□□□□ -1.18
PGBD4Q96DM1 AC073389.3-201ENST00000609434 935 ntBASIC7.66□□□□□ -1.18
PGBD4Q96DM1 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 AC090506.2-201ENST00000624521 419 ntBASIC7.66□□□□□ -1.18
PGBD4Q96DM1 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 MBD5-221ENST00000637159 902 ntTSL 5 BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 AC018688.1-201ENST00000636528 1754 ntBASIC7.66□□□□□ -1.18
PGBD4Q96DM1 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 AL359396.1-201ENST00000623151 2376 ntBASIC7.66□□□□□ -1.18
PGBD4Q96DM1 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
PGBD4Q96DM1 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 ARSFP1-201ENST00000398758 477 ntBASIC7.65□□□□□ -1.18
PGBD4Q96DM1 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 AL354794.2-201ENST00000424795 1248 ntBASIC7.65□□□□□ -1.18
PGBD4Q96DM1 MYO5BP3-201ENST00000431872 1279 ntBASIC7.65□□□□□ -1.18
PGBD4Q96DM1 AP000949.1-201ENST00000438328 629 ntBASIC7.65□□□□□ -1.18
PGBD4Q96DM1 AC234771.4-201ENST00000441416 730 ntBASIC7.65□□□□□ -1.18
PGBD4Q96DM1 HMGN1P32-201ENST00000441744 256 ntBASIC7.65□□□□□ -1.18
PGBD4Q96DM1 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 SDHCP3-201ENST00000445371 506 ntBASIC7.65□□□□□ -1.18
PGBD4Q96DM1 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 RPL9P15-201ENST00000491096 532 ntBASIC7.65□□□□□ -1.18
PGBD4Q96DM1 AK6-203ENST00000502819 743 ntTSL 5 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 AC004023.1-201ENST00000561473 1744 ntBASIC7.65□□□□□ -1.18
PGBD4Q96DM1 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 SNORA35B-201ENST00000607417 129 ntBASIC7.65□□□□□ -1.18
PGBD4Q96DM1 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC7.65□□□□□ -1.18
PGBD4Q96DM1 MRPL57P3-201ENST00000619218 176 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms