Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CPS1P31327 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC9.47□□□□□ -0.89
CPS1P31327 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC9.47□□□□□ -0.89
CPS1P31327 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CPS1P31327 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CPS1P31327 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CPS1P31327 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CPS1P31327 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
CPS1P31327 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
CPS1P31327 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CPS1P31327 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
CPS1P31327 AL596244.1-201ENST00000567068 3779 ntBASIC9.47□□□□□ -0.89
CPS1P31327 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC9.46□□□□□ -0.89
CPS1P31327 AC083806.2-201ENST00000617795 2685 ntBASIC9.46□□□□□ -0.89
CPS1P31327 DHFRP2-201ENST00000414224 547 ntBASIC9.46□□□□□ -0.89
CPS1P31327 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC9.46□□□□□ -0.89
CPS1P31327 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC9.46□□□□□ -0.89
CPS1P31327 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC9.46□□□□□ -0.89
CPS1P31327 OR4A21P-201ENST00000532759 944 ntBASIC9.46□□□□□ -0.89
CPS1P31327 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC9.46□□□□□ -0.89
CPS1P31327 AL390726.5-202ENST00000564800 256 ntBASIC9.46□□□□□ -0.89
CPS1P31327 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC9.46□□□□□ -0.89
CPS1P31327 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC9.46□□□□□ -0.89
CPS1P31327 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CPS1P31327 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC9.46□□□□□ -0.89
CPS1P31327 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
CPS1P31327 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CPS1P31327 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CPS1P31327 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC9.46□□□□□ -0.89
CPS1P31327 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
CPS1P31327 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC9.46□□□□□ -0.89
CPS1P31327 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
CPS1P31327 AC011592.1-201ENST00000624647 3634 ntBASIC9.46□□□□□ -0.9
CPS1P31327 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CPS1P31327 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CPS1P31327 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CPS1P31327 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CPS1P31327 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CPS1P31327 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC9.46□□□□□ -0.9
CPS1P31327 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CPS1P31327 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CPS1P31327 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC9.46□□□□□ -0.9
CPS1P31327 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CPS1P31327 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CPS1P31327 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
CPS1P31327 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CPS1P31327 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CPS1P31327 ATP6V1E1P1-201ENST00000439215 681 ntBASIC9.46□□□□□ -0.9
CPS1P31327 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC9.46□□□□□ -0.9
CPS1P31327 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC9.46□□□□□ -0.9
CPS1P31327 ODF1-202ENST00000518835 368 ntTSL 3 BASIC9.46□□□□□ -0.9
CPS1P31327 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC9.46□□□□□ -0.9
CPS1P31327 FXNP1-201ENST00000555153 337 ntBASIC9.46□□□□□ -0.9
CPS1P31327 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC9.46□□□□□ -0.9
CPS1P31327 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC9.46□□□□□ -0.9
CPS1P31327 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC9.46□□□□□ -0.9
CPS1P31327 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC9.46□□□□□ -0.9
CPS1P31327 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC9.46□□□□□ -0.9
CPS1P31327 AC004801.6-201ENST00000616571 978 ntBASIC9.46□□□□□ -0.9
CPS1P31327 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CPS1P31327 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CPS1P31327 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
CPS1P31327 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC9.45□□□□□ -0.9
CPS1P31327 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CPS1P31327 EIF3EP1-201ENST00000433978 1316 ntBASIC9.45□□□□□ -0.9
CPS1P31327 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC9.45□□□□□ -0.9
CPS1P31327 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CPS1P31327 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CPS1P31327 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CPS1P31327 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC9.45□□□□□ -0.9
CPS1P31327 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC9.45□□□□□ -0.9
CPS1P31327 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
CPS1P31327 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CPS1P31327 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CPS1P31327 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
CPS1P31327 AL353807.3-201ENST00000500626 2505 ntBASIC9.45□□□□□ -0.9
CPS1P31327 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CPS1P31327 ERMN-202ENST00000409216 746 ntTSL 4 BASIC9.45□□□□□ -0.9
CPS1P31327 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CPS1P31327 AC007394.1-201ENST00000421941 531 ntBASIC9.45□□□□□ -0.9
CPS1P31327 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC9.45□□□□□ -0.9
CPS1P31327 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC9.45□□□□□ -0.9
CPS1P31327 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC9.45□□□□□ -0.9
CPS1P31327 AP004607.6-201ENST00000525033 1202 ntBASIC9.45□□□□□ -0.9
CPS1P31327 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC9.45□□□□□ -0.9
CPS1P31327 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
CPS1P31327 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC9.45□□□□□ -0.9
CPS1P31327 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC9.45□□□□□ -0.9
CPS1P31327 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CPS1P31327 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CPS1P31327 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC9.44□□□□□ -0.9
CPS1P31327 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC9.44□□□□□ -0.9
CPS1P31327 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
CPS1P31327 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CPS1P31327 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
CPS1P31327 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
CPS1P31327 PHF2P2-202ENST00000444553 2865 ntBASIC9.44□□□□□ -0.9
CPS1P31327 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CPS1P31327 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC9.44□□□□□ -0.9
CPS1P31327 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms