Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL139824.2-201ENST00000458731 1095 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 AC063955.1-201ENST00000462872 685 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 AC008379.1-201ENST00000463655 464 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 RN7SL456P-201ENST00000469290 295 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 RN7SL152P-201ENST00000484176 298 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 AC233724.1-201ENST00000503894 233 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC8.66□□□□□ -1.02
ERCC3P19447 OR5M4P-201ENST00000529436 925 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 NPM1P35-201ENST00000533043 868 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
ERCC3P19447 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC8.66□□□□□ -1.02
ERCC3P19447 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC8.66□□□□□ -1.02
ERCC3P19447 AP000919.1-202ENST00000581139 1264 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 AL096855.2-201ENST00000605785 369 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC8.66□□□□□ -1.02
ERCC3P19447 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC8.66□□□□□ -1.02
ERCC3P19447 AC009283.1-201ENST00000615852 645 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ERCC3P19447 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC8.66□□□□□ -1.02
ERCC3P19447 RN7SL680P-201ENST00000620379 299 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 AL078595.3-201ENST00000623815 1166 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
ERCC3P19447 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
ERCC3P19447 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ERCC3P19447 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
ERCC3P19447 SAMMSON-203ENST00000641005 2168 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
ERCC3P19447 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
ERCC3P19447 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ERCC3P19447 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
ERCC3P19447 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ERCC3P19447 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
ERCC3P19447 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
ERCC3P19447 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
ERCC3P19447 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC8.65□□□□□ -1.02
ERCC3P19447 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ERCC3P19447 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.02
ERCC3P19447 AL096816.1-201ENST00000623300 2920 ntBASIC8.65□□□□□ -1.02
ERCC3P19447 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
ERCC3P19447 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC8.65□□□□□ -1.02
ERCC3P19447 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
ERCC3P19447 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ERCC3P19447 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ERCC3P19447 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC8.65□□□□□ -1.02
ERCC3P19447 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ERCC3P19447 AL121835.2-201ENST00000624253 3502 ntBASIC8.65□□□□□ -1.02
ERCC3P19447 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
ERCC3P19447 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
ERCC3P19447 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
ERCC3P19447 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.65□□□□□ -1.02
ERCC3P19447 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ERCC3P19447 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ERCC3P19447 U3.14-201ENST00000365363 227 ntBASIC8.65□□□□□ -1.02
ERCC3P19447 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
ERCC3P19447 NUS1P4-201ENST00000401550 585 ntBASIC8.65□□□□□ -1.02
ERCC3P19447 NPM1P37-201ENST00000403105 874 ntBASIC8.65□□□□□ -1.02
ERCC3P19447 AC004986.1-201ENST00000414855 607 ntBASIC8.65□□□□□ -1.02
ERCC3P19447 AC020983.1-201ENST00000417063 543 ntBASIC8.65□□□□□ -1.02
ERCC3P19447 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC8.65□□□□□ -1.02
ERCC3P19447 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC8.65□□□□□ -1.02
ERCC3P19447 ZNF736P7Y-201ENST00000425158 820 ntBASIC8.65□□□□□ -1.02
ERCC3P19447 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC8.65□□□□□ -1.02
ERCC3P19447 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC8.65□□□□□ -1.02
ERCC3P19447 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC8.65□□□□□ -1.02
ERCC3P19447 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC8.65□□□□□ -1.02
ERCC3P19447 AC022730.1-201ENST00000473114 568 ntBASIC8.65□□□□□ -1.02
ERCC3P19447 SETP6-201ENST00000479329 568 ntBASIC8.65□□□□□ -1.02
ERCC3P19447 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC8.65□□□□□ -1.02
ERCC3P19447 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
ERCC3P19447 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC8.65□□□□□ -1.02
ERCC3P19447 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC8.65□□□□□ -1.02
ERCC3P19447 BUD31P1-201ENST00000521828 359 ntBASIC8.65□□□□□ -1.02
ERCC3P19447 AC010376.1-201ENST00000522101 334 ntBASIC8.65□□□□□ -1.02
ERCC3P19447 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC8.65□□□□□ -1.02
ERCC3P19447 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC8.65□□□□□ -1.02
ERCC3P19447 EIF1P5-201ENST00000585002 234 ntBASIC8.65□□□□□ -1.02
ERCC3P19447 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC8.65□□□□□ -1.02
ERCC3P19447 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
ERCC3P19447 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC8.65□□□□□ -1.02
ERCC3P19447 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC8.65□□□□□ -1.02
ERCC3P19447 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
ERCC3P19447 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC8.65□□□□□ -1.02
ERCC3P19447 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.03
ERCC3P19447 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC8.65□□□□□ -1.03
ERCC3P19447 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC8.65□□□□□ -1.03
ERCC3P19447 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
ERCC3P19447 CCDC162P-202ENST00000368966 6751 ntBASIC8.65□□□□□ -1.03
ERCC3P19447 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC8.65□□□□□ -1.03
ERCC3P19447 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
ERCC3P19447 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
ERCC3P19447 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
ERCC3P19447 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
ERCC3P19447 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
ERCC3P19447 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC8.64□□□□□ -1.03
ERCC3P19447 CU633906.2-205ENST00000624847 1468 ntTSL 5 BASIC8.64□□□□□ -1.03
ERCC3P19447 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC8.64□□□□□ -1.03
ERCC3P19447 AL356317.1-201ENST00000396110 1436 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
ERCC3P19447 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
ERCC3P19447 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms