Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 FGG-204ENST00000405164 1539 ntTSL 5 BASIC8.47□□□□□ -1.05
LIG1P18858 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
LIG1P18858 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
LIG1P18858 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
LIG1P18858 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC8.47□□□□□ -1.05
LIG1P18858 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LIG1P18858 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.47□□□□□ -1.05
LIG1P18858 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LIG1P18858 AC009237.3-203ENST00000442128 3551 ntBASIC8.47□□□□□ -1.05
LIG1P18858 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LIG1P18858 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LIG1P18858 AC104162.1-201ENST00000430831 2382 ntBASIC8.47□□□□□ -1.05
LIG1P18858 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC8.47□□□□□ -1.05
LIG1P18858 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC8.47□□□□□ -1.05
LIG1P18858 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
LIG1P18858 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC8.46□□□□□ -1.05
LIG1P18858 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC8.46□□□□□ -1.05
LIG1P18858 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
LIG1P18858 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
LIG1P18858 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
LIG1P18858 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
LIG1P18858 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
LIG1P18858 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
LIG1P18858 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
LIG1P18858 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.05
LIG1P18858 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC8.46□□□□□ -1.05
LIG1P18858 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
LIG1P18858 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.05
LIG1P18858 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC8.46□□□□□ -1.05
LIG1P18858 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
LIG1P18858 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
LIG1P18858 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
LIG1P18858 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC8.46□□□□□ -1.05
LIG1P18858 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
LIG1P18858 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
LIG1P18858 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LIG1P18858 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LIG1P18858 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
LIG1P18858 CCNB2P1-201ENST00000399411 1150 ntBASIC8.46□□□□□ -1.06
LIG1P18858 AL353151.1-201ENST00000402406 604 ntBASIC8.46□□□□□ -1.06
LIG1P18858 AL358178.1-201ENST00000407698 397 ntBASIC8.46□□□□□ -1.06
LIG1P18858 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC8.46□□□□□ -1.06
LIG1P18858 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC8.46□□□□□ -1.06
LIG1P18858 EEF1B2P8-201ENST00000414101 671 ntBASIC8.46□□□□□ -1.06
LIG1P18858 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC8.46□□□□□ -1.06
LIG1P18858 BX119904.4-201ENST00000424402 301 ntBASIC8.46□□□□□ -1.06
LIG1P18858 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC8.46□□□□□ -1.06
LIG1P18858 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC8.46□□□□□ -1.06
LIG1P18858 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC8.46□□□□□ -1.06
LIG1P18858 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC8.46□□□□□ -1.06
LIG1P18858 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC8.46□□□□□ -1.06
LIG1P18858 RNFT1P2-201ENST00000443064 757 ntBASIC8.46□□□□□ -1.06
LIG1P18858 SETD6P1-201ENST00000444575 317 ntBASIC8.46□□□□□ -1.06
LIG1P18858 AL591719.1-201ENST00000444669 744 ntBASIC8.46□□□□□ -1.06
LIG1P18858 SUMO2P1-206ENST00000445436 284 ntBASIC8.46□□□□□ -1.06
LIG1P18858 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LIG1P18858 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC8.46□□□□□ -1.06
LIG1P18858 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC8.46□□□□□ -1.06
LIG1P18858 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC8.46□□□□□ -1.06
LIG1P18858 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC8.46□□□□□ -1.06
LIG1P18858 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LIG1P18858 TPTE2P5-203ENST00000458118 728 ntBASIC8.46□□□□□ -1.06
LIG1P18858 SNORD11.1-201ENST00000459482 85 ntBASIC8.46□□□□□ -1.06
LIG1P18858 RN7SL91P-201ENST00000469313 291 ntBASIC8.46□□□□□ -1.06
LIG1P18858 AC009153.1-201ENST00000485799 496 ntBASIC8.46□□□□□ -1.06
LIG1P18858 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC8.46□□□□□ -1.06
LIG1P18858 AC138866.1-201ENST00000514522 497 ntBASIC8.46□□□□□ -1.06
LIG1P18858 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC8.46□□□□□ -1.06
LIG1P18858 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC8.46□□□□□ -1.06
LIG1P18858 IGLVI-42-201ENST00000522485 381 ntBASIC8.46□□□□□ -1.06
LIG1P18858 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC8.46□□□□□ -1.06
LIG1P18858 AP003033.1-201ENST00000527244 415 ntBASIC8.46□□□□□ -1.06
LIG1P18858 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC8.46□□□□□ -1.06
LIG1P18858 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC8.46□□□□□ -1.06
LIG1P18858 AC234775.3-201ENST00000564612 656 ntBASIC8.46□□□□□ -1.06
LIG1P18858 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC8.46□□□□□ -1.06
LIG1P18858 BMS1P8-201ENST00000565049 1178 ntBASIC8.46□□□□□ -1.06
LIG1P18858 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LIG1P18858 MIR6726-201ENST00000613751 61 ntBASIC8.46□□□□□ -1.06
LIG1P18858 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LIG1P18858 AP003485.2-201ENST00000623636 610 ntBASIC8.46□□□□□ -1.06
LIG1P18858 AL132796.3-201ENST00000624703 900 ntBASIC8.46□□□□□ -1.06
LIG1P18858 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LIG1P18858 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.46□□□□□ -1.06
LIG1P18858 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LIG1P18858 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LIG1P18858 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
LIG1P18858 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
LIG1P18858 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
LIG1P18858 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC8.46□□□□□ -1.06
LIG1P18858 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LIG1P18858 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC8.46□□□□□ -1.06
LIG1P18858 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
LIG1P18858 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
LIG1P18858 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC8.46□□□□□ -1.06
LIG1P18858 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
LIG1P18858 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LIG1P18858 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC8.45□□□□□ -1.06
LIG1P18858 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LIG1P18858 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms