Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC007221.1-201ENST00000570038 796 ntTSL 5 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 AC006967.3-201ENST00000594086 1093 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 AC079089.3-201ENST00000603094 673 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 LINC02018-202ENST00000608707 445 ntTSL 3 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 AC009093.6-201ENST00000622268 553 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 AC091059.2-201ENST00000623355 614 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 AC095031.1-201ENST00000623685 672 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 AC026336.5-201ENST00000624455 738 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 AC119674.1-201ENST00000641611 1210 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 HCG18-244ENST00000602516 2890 ntBASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 TMEM68-201ENST00000334667 2401 ntTSL 2 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC8.41□□□□□ -1.06
FOXR1Q6PIV2 ERMARD-205ENST00000418781 1841 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 WASF4P-201ENST00000444248 1494 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 SPINK6-201ENST00000325630 686 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 RN7SKP173-201ENST00000362821 315 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 CREM-213ENST00000374734 711 ntTSL 5 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 RPL5P8-201ENST00000396820 815 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 MED15P8-201ENST00000411601 545 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 ELOCP9-201ENST00000418624 239 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 MTCO2P34-201ENST00000421994 607 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 RNF11P2-201ENST00000427702 440 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 GTF2IP3-201ENST00000433887 494 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 AC244205.2-201ENST00000434790 898 ntTSL 5 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 TMEM127-203ENST00000435268 582 ntTSL 3 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 RPL5P27-201ENST00000437011 881 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 AC241584.1-201ENST00000438469 1241 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 FGF7P5-201ENST00000441829 291 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 AC090954.1-201ENST00000445502 361 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 AL365436.1-201ENST00000452587 495 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 ZNF114P1-201ENST00000453500 292 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 CREM-231ENST00000479070 939 ntTSL 5 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 HNRNPA1P20-201ENST00000484852 955 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 KRT19P6-201ENST00000510983 209 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 CR383658.1-201ENST00000514609 734 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 RNU6-889P-201ENST00000517189 103 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 CA1-219ENST00000523022 1208 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 AC005833.4-201ENST00000542988 449 ntTSL 3 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 AC019209.1-201ENST00000544399 486 ntTSL 2 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 GLYCAM1-201ENST00000546596 285 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 BLZF2P-201ENST00000553776 1130 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 AC245505.1-201ENST00000556398 224 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 TBX18-AS1-208ENST00000591225 762 ntTSL 5 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 LSM1P2-201ENST00000604911 322 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 AL121928.1-201ENST00000608017 521 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 ADAL-208ENST00000610420 974 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 GMFB-210ENST00000628554 639 ntTSL 4 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 AL034408.1-201ENST00000637712 664 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 CASC19-274ENST00000642018 970 ntBASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
FOXR1Q6PIV2 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
FOXR1Q6PIV2 AC036108.3-201ENST00000564527 2677 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
FOXR1Q6PIV2 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
FOXR1Q6PIV2 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
FOXR1Q6PIV2 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.07
FOXR1Q6PIV2 AL589993.1-201ENST00000407450 2524 ntBASIC8.4□□□□□ -1.07
FOXR1Q6PIV2 AL078595.2-201ENST00000605309 1780 ntBASIC8.4□□□□□ -1.07
FOXR1Q6PIV2 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms