Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
UBE3AQ05086 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
UBE3AQ05086 AC025040.2-201ENST00000558657 1852 ntBASIC7.43□□□□□ -1.22
UBE3AQ05086 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
UBE3AQ05086 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
UBE3AQ05086 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
UBE3AQ05086 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
UBE3AQ05086 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.43□□□□□ -1.22
UBE3AQ05086 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
UBE3AQ05086 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.43□□□□□ -1.22
UBE3AQ05086 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
UBE3AQ05086 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
UBE3AQ05086 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
UBE3AQ05086 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.43□□□□□ -1.22
UBE3AQ05086 VN1R66P-201ENST00000412929 916 ntBASIC7.43□□□□□ -1.22
UBE3AQ05086 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.43□□□□□ -1.22
UBE3AQ05086 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.43□□□□□ -1.22
UBE3AQ05086 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC7.43□□□□□ -1.22
UBE3AQ05086 RPL5P10-201ENST00000445207 894 ntBASIC7.43□□□□□ -1.22
UBE3AQ05086 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.43□□□□□ -1.22
UBE3AQ05086 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.43□□□□□ -1.22
UBE3AQ05086 AKR1D1P1-201ENST00000457236 936 ntBASIC7.43□□□□□ -1.22
UBE3AQ05086 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC7.43□□□□□ -1.22
UBE3AQ05086 RN7SL654P-201ENST00000479178 292 ntBASIC7.43□□□□□ -1.22
UBE3AQ05086 GUSBP9-201ENST00000510138 584 ntBASIC7.43□□□□□ -1.22
UBE3AQ05086 AC027801.3-201ENST00000515049 698 ntBASIC7.43□□□□□ -1.22
UBE3AQ05086 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.43□□□□□ -1.22
UBE3AQ05086 AC087752.2-201ENST00000521219 281 ntBASIC7.43□□□□□ -1.22
UBE3AQ05086 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.43□□□□□ -1.22
UBE3AQ05086 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.43□□□□□ -1.22
UBE3AQ05086 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.43□□□□□ -1.22
UBE3AQ05086 AC012175.1-201ENST00000603755 531 ntBASIC7.43□□□□□ -1.22
UBE3AQ05086 AC079791.1-201ENST00000605356 973 ntBASIC7.43□□□□□ -1.22
UBE3AQ05086 AC104184.1-201ENST00000607513 721 ntBASIC7.43□□□□□ -1.22
UBE3AQ05086 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC7.43□□□□□ -1.22
UBE3AQ05086 SNORD91A-202ENST00000609620 191 ntBASIC7.43□□□□□ -1.22
UBE3AQ05086 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.43□□□□□ -1.22
UBE3AQ05086 AC079414.3-201ENST00000612986 1090 ntBASIC7.43□□□□□ -1.22
UBE3AQ05086 AL355480.1-201ENST00000629041 99 ntBASIC7.43□□□□□ -1.22
UBE3AQ05086 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC7.43□□□□□ -1.22
UBE3AQ05086 MAPK10-377ENST00000642006 2752 ntBASIC7.43□□□□□ -1.22
UBE3AQ05086 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
UBE3AQ05086 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.43□□□□□ -1.22
UBE3AQ05086 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
UBE3AQ05086 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
UBE3AQ05086 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
UBE3AQ05086 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC7.43□□□□□ -1.22
UBE3AQ05086 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
UBE3AQ05086 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
UBE3AQ05086 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.43□□□□□ -1.22
UBE3AQ05086 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
UBE3AQ05086 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.43□□□□□ -1.22
UBE3AQ05086 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.43□□□□□ -1.22
UBE3AQ05086 AC008555.1-201ENST00000561778 2757 ntBASIC7.42□□□□□ -1.22
UBE3AQ05086 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
UBE3AQ05086 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
UBE3AQ05086 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
UBE3AQ05086 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC7.42□□□□□ -1.22
UBE3AQ05086 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC7.42□□□□□ -1.22
UBE3AQ05086 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
UBE3AQ05086 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
UBE3AQ05086 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
UBE3AQ05086 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.42□□□□□ -1.22
UBE3AQ05086 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
UBE3AQ05086 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
UBE3AQ05086 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
UBE3AQ05086 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
UBE3AQ05086 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.42□□□□□ -1.22
UBE3AQ05086 GAPDHP37-201ENST00000442317 968 ntBASIC7.42□□□□□ -1.22
UBE3AQ05086 SDHCP3-201ENST00000445371 506 ntBASIC7.42□□□□□ -1.22
UBE3AQ05086 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC7.42□□□□□ -1.22
UBE3AQ05086 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.42□□□□□ -1.22
UBE3AQ05086 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.42□□□□□ -1.22
UBE3AQ05086 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.42□□□□□ -1.22
UBE3AQ05086 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.42□□□□□ -1.22
UBE3AQ05086 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.42□□□□□ -1.22
UBE3AQ05086 SETP17-201ENST00000534163 817 ntBASIC7.42□□□□□ -1.22
UBE3AQ05086 AC007537.1-201ENST00000539347 327 ntBASIC7.42□□□□□ -1.22
UBE3AQ05086 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.42□□□□□ -1.22
UBE3AQ05086 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC7.42□□□□□ -1.22
UBE3AQ05086 RN7SL230P-201ENST00000580835 303 ntBASIC7.42□□□□□ -1.22
UBE3AQ05086 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.42□□□□□ -1.22
UBE3AQ05086 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC7.42□□□□□ -1.22
UBE3AQ05086 MIR6778-201ENST00000617912 73 ntBASIC7.42□□□□□ -1.22
UBE3AQ05086 AP005212.3-201ENST00000619964 528 ntBASIC7.42□□□□□ -1.22
UBE3AQ05086 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
UBE3AQ05086 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.42□□□□□ -1.22
UBE3AQ05086 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
UBE3AQ05086 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.42□□□□□ -1.22
UBE3AQ05086 AL359396.1-201ENST00000623151 2376 ntBASIC7.42□□□□□ -1.22
UBE3AQ05086 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
UBE3AQ05086 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
UBE3AQ05086 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
UBE3AQ05086 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.42□□□□□ -1.22
UBE3AQ05086 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
UBE3AQ05086 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.42□□□□□ -1.22
UBE3AQ05086 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.42□□□□□ -1.22
UBE3AQ05086 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC7.42□□□□□ -1.22
UBE3AQ05086 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
UBE3AQ05086 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms