Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
SRP9P49458 AC073581.1-201ENST00000519036 575 ntBASIC6.1□□□□□ -1.43
SRP9P49458 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SRP9P49458 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.1□□□□□ -1.43
SRP9P49458 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SRP9P49458 AC016144.1-201ENST00000548175 1087 ntBASIC6.1□□□□□ -1.43
SRP9P49458 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.1□□□□□ -1.43
SRP9P49458 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC6.1□□□□□ -1.43
SRP9P49458 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC6.1□□□□□ -1.43
SRP9P49458 AC023827.2-201ENST00000566880 1061 ntBASIC6.1□□□□□ -1.43
SRP9P49458 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.1□□□□□ -1.43
SRP9P49458 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.1□□□□□ -1.43
SRP9P49458 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.1□□□□□ -1.43
SRP9P49458 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC6.1□□□□□ -1.43
SRP9P49458 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SRP9P49458 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.1□□□□□ -1.43
SRP9P49458 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SRP9P49458 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SRP9P49458 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
SRP9P49458 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SRP9P49458 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SRP9P49458 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SRP9P49458 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SRP9P49458 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SRP9P49458 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.1□□□□□ -1.43
SRP9P49458 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SRP9P49458 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SRP9P49458 API5P1-201ENST00000424316 1510 ntBASIC6.09□□□□□ -1.43
SRP9P49458 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SRP9P49458 OFD1P17-201ENST00000437639 3018 ntBASIC6.09□□□□□ -1.43
SRP9P49458 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SRP9P49458 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SRP9P49458 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SRP9P49458 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SRP9P49458 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
SRP9P49458 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SRP9P49458 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SRP9P49458 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SRP9P49458 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SRP9P49458 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.09□□□□□ -1.43
SRP9P49458 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SRP9P49458 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SRP9P49458 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
SRP9P49458 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.09□□□□□ -1.43
SRP9P49458 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.09□□□□□ -1.43
SRP9P49458 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
SRP9P49458 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SRP9P49458 RNA5SP177-201ENST00000410122 107 ntBASIC6.09□□□□□ -1.43
SRP9P49458 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.09□□□□□ -1.43
SRP9P49458 KATNBL1P2-201ENST00000433311 835 ntBASIC6.09□□□□□ -1.43
SRP9P49458 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.09□□□□□ -1.43
SRP9P49458 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.09□□□□□ -1.43
SRP9P49458 PRDX1P1-201ENST00000449329 596 ntBASIC6.09□□□□□ -1.43
SRP9P49458 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC6.09□□□□□ -1.43
SRP9P49458 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.09□□□□□ -1.43
SRP9P49458 BX323845.2-201ENST00000458382 234 ntBASIC6.09□□□□□ -1.43
SRP9P49458 AC135721.2-201ENST00000464237 300 ntBASIC6.09□□□□□ -1.43
SRP9P49458 PABPC1P10-201ENST00000464731 381 ntBASIC6.09□□□□□ -1.43
SRP9P49458 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SRP9P49458 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.09□□□□□ -1.43
SRP9P49458 AP005202.1-201ENST00000489915 867 ntBASIC6.09□□□□□ -1.43
SRP9P49458 RN7SL306P-201ENST00000492941 296 ntBASIC6.09□□□□□ -1.43
SRP9P49458 RN7SL775P-201ENST00000498361 336 ntBASIC6.09□□□□□ -1.43
SRP9P49458 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.09□□□□□ -1.43
SRP9P49458 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SRP9P49458 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.09□□□□□ -1.43
SRP9P49458 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SRP9P49458 OR5M4P-201ENST00000529436 925 ntBASIC6.09□□□□□ -1.43
SRP9P49458 OR4C1P-201ENST00000530880 937 ntBASIC6.09□□□□□ -1.43
SRP9P49458 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.09□□□□□ -1.43
SRP9P49458 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.09□□□□□ -1.43
SRP9P49458 AC113361.1-201ENST00000606683 543 ntBASIC6.09□□□□□ -1.43
SRP9P49458 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.09□□□□□ -1.43
SRP9P49458 AL049541.2-201ENST00000626377 555 ntBASIC6.09□□□□□ -1.43
SRP9P49458 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.09□□□□□ -1.43
SRP9P49458 AL355377.1-201ENST00000621125 1653 ntBASIC6.09□□□□□ -1.43
SRP9P49458 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SRP9P49458 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SRP9P49458 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
SRP9P49458 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.09□□□□□ -1.44
SRP9P49458 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SRP9P49458 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SRP9P49458 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SRP9P49458 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.08□□□□□ -1.44
SRP9P49458 AC125232.1-201ENST00000452554 1408 ntBASIC6.08□□□□□ -1.44
SRP9P49458 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.08□□□□□ -1.44
SRP9P49458 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.08□□□□□ -1.44
SRP9P49458 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SRP9P49458 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SRP9P49458 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SRP9P49458 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
SRP9P49458 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SRP9P49458 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SRP9P49458 RNU4-81P-201ENST00000363561 144 ntBASIC6.08□□□□□ -1.44
SRP9P49458 RNA5SP472-201ENST00000363868 119 ntBASIC6.08□□□□□ -1.44
SRP9P49458 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SRP9P49458 FAM204BP-201ENST00000369171 701 ntBASIC6.08□□□□□ -1.44
SRP9P49458 MIR152-201ENST00000385212 87 ntBASIC6.08□□□□□ -1.44
SRP9P49458 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SRP9P49458 RPL9P21-201ENST00000392269 505 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms