Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC7.71□□□□□ -1.18
CIITAP33076 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CIITAP33076 AC092634.1-201ENST00000366505 199 ntBASIC7.71□□□□□ -1.18
CIITAP33076 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CIITAP33076 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CIITAP33076 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CIITAP33076 UBBP1-201ENST00000392399 473 ntBASIC7.71□□□□□ -1.18
CIITAP33076 AL590635.1-201ENST00000406314 586 ntBASIC7.71□□□□□ -1.18
CIITAP33076 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC7.71□□□□□ -1.18
CIITAP33076 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CIITAP33076 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.71□□□□□ -1.18
CIITAP33076 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CIITAP33076 RPS3AP49-201ENST00000472161 790 ntBASIC7.71□□□□□ -1.18
CIITAP33076 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.71□□□□□ -1.18
CIITAP33076 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CIITAP33076 MINOS1P4-201ENST00000515470 318 ntBASIC7.71□□□□□ -1.18
CIITAP33076 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.71□□□□□ -1.18
CIITAP33076 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.71□□□□□ -1.18
CIITAP33076 AC131935.1-201ENST00000524621 333 ntBASIC7.71□□□□□ -1.18
CIITAP33076 AC007068.2-201ENST00000543168 395 ntBASIC7.71□□□□□ -1.18
CIITAP33076 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.71□□□□□ -1.18
CIITAP33076 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.71□□□□□ -1.18
CIITAP33076 PPIAP14-201ENST00000577627 496 ntBASIC7.71□□□□□ -1.18
CIITAP33076 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.71□□□□□ -1.18
CIITAP33076 AC091768.1-201ENST00000609258 930 ntBASIC7.71□□□□□ -1.18
CIITAP33076 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CIITAP33076 AC131009.3-201ENST00000621809 287 ntBASIC7.71□□□□□ -1.18
CIITAP33076 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.71□□□□□ -1.18
CIITAP33076 AC006328.2-201ENST00000623198 397 ntBASIC7.71□□□□□ -1.18
CIITAP33076 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC7.71□□□□□ -1.18
CIITAP33076 AC012005.2-201ENST00000624333 397 ntBASIC7.71□□□□□ -1.18
CIITAP33076 AC005858.3-201ENST00000624756 589 ntBASIC7.71□□□□□ -1.18
CIITAP33076 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
CIITAP33076 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.71□□□□□ -1.18
CIITAP33076 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.71□□□□□ -1.18
CIITAP33076 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.71□□□□□ -1.18
CIITAP33076 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
CIITAP33076 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CIITAP33076 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
CIITAP33076 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CIITAP33076 AC138915.4-201ENST00000565549 4147 ntBASIC7.71□□□□□ -1.18
CIITAP33076 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.7□□□□□ -1.18
CIITAP33076 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
CIITAP33076 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
CIITAP33076 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 AC079248.1-201ENST00000427568 1546 ntBASIC7.7□□□□□ -1.18
CIITAP33076 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CIITAP33076 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.7□□□□□ -1.18
CIITAP33076 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC7.7□□□□□ -1.18
CIITAP33076 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CIITAP33076 ARSFP1-201ENST00000398758 477 ntBASIC7.7□□□□□ -1.18
CIITAP33076 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.7□□□□□ -1.18
CIITAP33076 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.7□□□□□ -1.18
CIITAP33076 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CIITAP33076 GAPDHP57-201ENST00000424400 585 ntBASIC7.7□□□□□ -1.18
CIITAP33076 AP003385.1-201ENST00000426387 893 ntBASIC7.7□□□□□ -1.18
CIITAP33076 AL121578.1-201ENST00000428051 892 ntBASIC7.7□□□□□ -1.18
CIITAP33076 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 CRYGGP-201ENST00000443337 145 ntBASIC7.7□□□□□ -1.18
CIITAP33076 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 RN7SL834P-201ENST00000461450 286 ntBASIC7.7□□□□□ -1.18
CIITAP33076 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC7.7□□□□□ -1.18
CIITAP33076 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC7.7□□□□□ -1.18
CIITAP33076 RPL23AP80-201ENST00000495605 424 ntBASIC7.7□□□□□ -1.18
CIITAP33076 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.7□□□□□ -1.18
CIITAP33076 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC7.7□□□□□ -1.18
CIITAP33076 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
CIITAP33076 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.7□□□□□ -1.18
CIITAP33076 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
CIITAP33076 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC7.7□□□□□ -1.18
CIITAP33076 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC7.7□□□□□ -1.18
CIITAP33076 AC068408.1-201ENST00000577406 1144 ntBASIC7.7□□□□□ -1.18
CIITAP33076 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.7□□□□□ -1.18
CIITAP33076 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.7□□□□□ -1.18
CIITAP33076 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.7□□□□□ -1.18
CIITAP33076 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CIITAP33076 MBD5-221ENST00000637159 902 ntTSL 5 BASIC7.7□□□□□ -1.18
CIITAP33076 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.7□□□□□ -1.18
CIITAP33076 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.7□□□□□ -1.18
CIITAP33076 OR5M2P-202ENST00000641241 4242 ntBASIC7.7□□□□□ -1.18
CIITAP33076 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.7□□□□□ -1.18
CIITAP33076 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 RACGAP1P-201ENST00000550663 1879 ntBASIC7.7□□□□□ -1.18
CIITAP33076 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.7□□□□□ -1.18
CIITAP33076 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms