Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.14□□□□□ -1.27
CHRNB1P11230 IGKV2-4-201ENST00000523070 340 ntBASIC7.14□□□□□ -1.27
CHRNB1P11230 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.14□□□□□ -1.27
CHRNB1P11230 AC009729.1-201ENST00000548873 1133 ntBASIC7.14□□□□□ -1.27
CHRNB1P11230 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.14□□□□□ -1.27
CHRNB1P11230 MT1CP-201ENST00000567054 174 ntBASIC7.14□□□□□ -1.27
CHRNB1P11230 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.14□□□□□ -1.27
CHRNB1P11230 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.14□□□□□ -1.27
CHRNB1P11230 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CHRNB1P11230 WBP1LP12-201ENST00000604449 331 ntBASIC7.14□□□□□ -1.27
CHRNB1P11230 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
CHRNB1P11230 AC068726.1-201ENST00000610993 341 ntBASIC7.14□□□□□ -1.27
CHRNB1P11230 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.14□□□□□ -1.27
CHRNB1P11230 AC127071.2-201ENST00000623293 527 ntBASIC7.14□□□□□ -1.27
CHRNB1P11230 AL683826.1-201ENST00000624104 627 ntBASIC7.14□□□□□ -1.27
CHRNB1P11230 AC015871.4-201ENST00000624650 2260 ntBASIC7.14□□□□□ -1.27
CHRNB1P11230 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.14□□□□□ -1.27
CHRNB1P11230 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.14□□□□□ -1.27
CHRNB1P11230 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.14□□□□□ -1.27
CHRNB1P11230 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CHRNB1P11230 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
CHRNB1P11230 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CHRNB1P11230 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.13□□□□□ -1.27
CHRNB1P11230 AL133320.1-201ENST00000621423 2352 ntBASIC7.13□□□□□ -1.27
CHRNB1P11230 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.13□□□□□ -1.27
CHRNB1P11230 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CHRNB1P11230 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHRNB1P11230 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
CHRNB1P11230 SPATA31C2-201ENST00000324915 3777 ntBASIC7.13□□□□□ -1.27
CHRNB1P11230 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHRNB1P11230 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CHRNB1P11230 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CHRNB1P11230 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHRNB1P11230 CDY19P-201ENST00000411668 1613 ntBASIC7.13□□□□□ -1.27
CHRNB1P11230 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CHRNB1P11230 CDY18P-201ENST00000438294 1609 ntBASIC7.13□□□□□ -1.27
CHRNB1P11230 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.13□□□□□ -1.27
CHRNB1P11230 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHRNB1P11230 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHRNB1P11230 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHRNB1P11230 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHRNB1P11230 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHRNB1P11230 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.13□□□□□ -1.27
CHRNB1P11230 FDPSP5-201ENST00000399474 1057 ntBASIC7.13□□□□□ -1.27
CHRNB1P11230 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC7.13□□□□□ -1.27
CHRNB1P11230 RPL34P19-201ENST00000415903 342 ntBASIC7.13□□□□□ -1.27
CHRNB1P11230 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.13□□□□□ -1.27
CHRNB1P11230 AL022100.1-202ENST00000421214 548 ntBASIC7.13□□□□□ -1.27
CHRNB1P11230 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.13□□□□□ -1.27
CHRNB1P11230 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.13□□□□□ -1.27
CHRNB1P11230 RN7SL797P-201ENST00000486314 297 ntBASIC7.13□□□□□ -1.27
CHRNB1P11230 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.13□□□□□ -1.27
CHRNB1P11230 MTCO3P42-201ENST00000509488 518 ntBASIC7.13□□□□□ -1.27
CHRNB1P11230 MTCO3P39-201ENST00000514812 518 ntBASIC7.13□□□□□ -1.27
CHRNB1P11230 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.13□□□□□ -1.27
CHRNB1P11230 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.13□□□□□ -1.27
CHRNB1P11230 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.13□□□□□ -1.27
CHRNB1P11230 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.13□□□□□ -1.27
CHRNB1P11230 AL499605.1-201ENST00000604628 403 ntBASIC7.13□□□□□ -1.27
CHRNB1P11230 AP002345.2-201ENST00000609961 904 ntBASIC7.13□□□□□ -1.27
CHRNB1P11230 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CHRNB1P11230 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.13□□□□□ -1.27
CHRNB1P11230 uc_338.29-201ENST00000615099 168 ntBASIC7.13□□□□□ -1.27
CHRNB1P11230 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHRNB1P11230 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.13□□□□□ -1.27
CHRNB1P11230 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CHRNB1P11230 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CHRNB1P11230 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CHRNB1P11230 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.13□□□□□ -1.27
CHRNB1P11230 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CHRNB1P11230 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CHRNB1P11230 AC018688.1-201ENST00000636528 1754 ntBASIC7.13□□□□□ -1.27
CHRNB1P11230 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHRNB1P11230 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CHRNB1P11230 SALL1P1-201ENST00000438101 3837 ntBASIC7.12□□□□□ -1.27
CHRNB1P11230 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
CHRNB1P11230 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CHRNB1P11230 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CHRNB1P11230 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CHRNB1P11230 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.12□□□□□ -1.27
CHRNB1P11230 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CHRNB1P11230 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CHRNB1P11230 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CHRNB1P11230 AC083806.2-201ENST00000617795 2685 ntBASIC7.12□□□□□ -1.27
CHRNB1P11230 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC7.12□□□□□ -1.27
CHRNB1P11230 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CHRNB1P11230 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CHRNB1P11230 RNA5SP85-201ENST00000365378 119 ntBASIC7.12□□□□□ -1.27
CHRNB1P11230 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CHRNB1P11230 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CHRNB1P11230 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.12□□□□□ -1.27
CHRNB1P11230 AC017035.1-201ENST00000411999 1115 ntBASIC7.12□□□□□ -1.27
CHRNB1P11230 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC7.12□□□□□ -1.27
CHRNB1P11230 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC7.12□□□□□ -1.27
CHRNB1P11230 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.12□□□□□ -1.27
CHRNB1P11230 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.12□□□□□ -1.27
CHRNB1P11230 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.12□□□□□ -1.27
CHRNB1P11230 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
CHRNB1P11230 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CHRNB1P11230 AL157385.1-201ENST00000446973 268 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms