Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
HLA-DOAP06340 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
HLA-DOAP06340 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HLA-DOAP06340 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 AC023818.2-201ENST00000623817 2304 ntBASIC8.08□□□□□ -1.12
HLA-DOAP06340 AC007938.1-201ENST00000562524 2902 ntBASIC8.08□□□□□ -1.12
HLA-DOAP06340 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
HLA-DOAP06340 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
HLA-DOAP06340 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
HLA-DOAP06340 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
HLA-DOAP06340 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC8.08□□□□□ -1.12
HLA-DOAP06340 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.07□□□□□ -1.12
HLA-DOAP06340 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HLA-DOAP06340 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC8.07□□□□□ -1.12
HLA-DOAP06340 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC8.07□□□□□ -1.12
HLA-DOAP06340 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HLA-DOAP06340 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HLA-DOAP06340 HCG18-244ENST00000602516 2890 ntBASIC8.07□□□□□ -1.12
HLA-DOAP06340 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC8.07□□□□□ -1.12
HLA-DOAP06340 MRPS17P1-201ENST00000596009 3130 ntBASIC8.07□□□□□ -1.12
HLA-DOAP06340 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC8.07□□□□□ -1.12
HLA-DOAP06340 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HLA-DOAP06340 AL590635.1-201ENST00000406314 586 ntBASIC8.07□□□□□ -1.12
HLA-DOAP06340 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC8.07□□□□□ -1.12
HLA-DOAP06340 SMC4P1-201ENST00000414479 527 ntBASIC8.07□□□□□ -1.12
HLA-DOAP06340 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC8.07□□□□□ -1.12
HLA-DOAP06340 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC8.07□□□□□ -1.12
HLA-DOAP06340 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC8.07□□□□□ -1.12
HLA-DOAP06340 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC8.07□□□□□ -1.12
HLA-DOAP06340 CYP4F32P-201ENST00000426492 504 ntBASIC8.07□□□□□ -1.12
HLA-DOAP06340 BMP6P1-201ENST00000431230 679 ntBASIC8.07□□□□□ -1.12
HLA-DOAP06340 AC245047.1-201ENST00000433276 873 ntBASIC8.07□□□□□ -1.12
HLA-DOAP06340 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC8.07□□□□□ -1.12
HLA-DOAP06340 RBMY2HP-201ENST00000457961 720 ntBASIC8.07□□□□□ -1.12
HLA-DOAP06340 RPS7P10-201ENST00000464254 603 ntBASIC8.07□□□□□ -1.12
HLA-DOAP06340 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC8.07□□□□□ -1.12
HLA-DOAP06340 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC8.07□□□□□ -1.12
HLA-DOAP06340 RPS10P20-201ENST00000494130 463 ntBASIC8.07□□□□□ -1.12
HLA-DOAP06340 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
HLA-DOAP06340 AC112225.1-201ENST00000508230 297 ntBASIC8.07□□□□□ -1.12
HLA-DOAP06340 AC115837.1-201ENST00000517662 1001 ntBASIC8.07□□□□□ -1.12
HLA-DOAP06340 AC005519.1-201ENST00000554490 601 ntBASIC8.07□□□□□ -1.12
HLA-DOAP06340 HNRNPA1P74-201ENST00000560782 835 ntBASIC8.07□□□□□ -1.12
HLA-DOAP06340 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC8.07□□□□□ -1.12
HLA-DOAP06340 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC8.07□□□□□ -1.12
HLA-DOAP06340 GAPDHP41-201ENST00000613707 975 ntBASIC8.07□□□□□ -1.12
HLA-DOAP06340 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC8.07□□□□□ -1.12
HLA-DOAP06340 TEX41-293ENST00000630451 690 ntTSL 5 BASIC8.07□□□□□ -1.12
HLA-DOAP06340 AC183089.2-201ENST00000637931 916 ntBASIC8.07□□□□□ -1.12
HLA-DOAP06340 AC034111.1-201ENST00000562143 3770 ntBASIC8.07□□□□□ -1.12
HLA-DOAP06340 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
HLA-DOAP06340 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HLA-DOAP06340 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC8.07□□□□□ -1.12
HLA-DOAP06340 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-DOAP06340 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-DOAP06340 CA10-204ENST00000570565 2276 ntTSL 5 BASIC8.06□□□□□ -1.12
HLA-DOAP06340 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC8.06□□□□□ -1.12
HLA-DOAP06340 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-DOAP06340 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC8.06□□□□□ -1.12
HLA-DOAP06340 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-DOAP06340 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC8.06□□□□□ -1.12
HLA-DOAP06340 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-DOAP06340 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-DOAP06340 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
HLA-DOAP06340 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
HLA-DOAP06340 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-DOAP06340 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-DOAP06340 SNORA64.3-201ENST00000365647 134 ntBASIC8.06□□□□□ -1.12
HLA-DOAP06340 AL133260.1-201ENST00000405720 405 ntBASIC8.06□□□□□ -1.12
HLA-DOAP06340 AC006455.6-201ENST00000426192 893 ntBASIC8.06□□□□□ -1.12
HLA-DOAP06340 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-DOAP06340 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
HLA-DOAP06340 AC128677.1-201ENST00000436016 442 ntBASIC8.06□□□□□ -1.12
HLA-DOAP06340 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC8.06□□□□□ -1.12
HLA-DOAP06340 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
HLA-DOAP06340 AC091849.1-201ENST00000509920 121 ntBASIC8.06□□□□□ -1.12
HLA-DOAP06340 MTND2P31-201ENST00000512602 616 ntBASIC8.06□□□□□ -1.12
HLA-DOAP06340 AP003033.2-201ENST00000528901 805 ntBASIC8.06□□□□□ -1.12
HLA-DOAP06340 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC8.06□□□□□ -1.12
HLA-DOAP06340 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC8.06□□□□□ -1.12
HLA-DOAP06340 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC8.06□□□□□ -1.12
HLA-DOAP06340 RPL29P33-201ENST00000587474 316 ntBASIC8.06□□□□□ -1.12
HLA-DOAP06340 AC010463.3-201ENST00000594077 500 ntBASIC8.06□□□□□ -1.12
HLA-DOAP06340 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC8.06□□□□□ -1.12
HLA-DOAP06340 MIR6823-201ENST00000622118 61 ntBASIC8.06□□□□□ -1.12
HLA-DOAP06340 SNORA16A-202ENST00000628458 135 ntBASIC8.06□□□□□ -1.12
HLA-DOAP06340 DDX43P1-201ENST00000510713 1763 ntBASIC8.06□□□□□ -1.12
HLA-DOAP06340 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-DOAP06340 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-DOAP06340 SPATA31C2-201ENST00000324915 3777 ntBASIC8.06□□□□□ -1.12
HLA-DOAP06340 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-DOAP06340 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HLA-DOAP06340 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
HLA-DOAP06340 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms