Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC006070.1-201ENST00000508151 193 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 AC008496.1-201ENST00000509131 295 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 AC120036.3-201ENST00000517826 292 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNX18Q96RF0 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 OR4R2P-201ENST00000530815 597 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNX18Q96RF0 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 AC092368.2-201ENST00000565911 600 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 AC017076.1-201ENST00000607613 578 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 RAB28P4-201ENST00000622233 665 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 AL353898.2-201ENST00000623000 255 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 AC106795.5-201ENST00000623288 454 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 AC020763.5-201ENST00000623298 430 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNX18Q96RF0 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SNX18Q96RF0 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SNX18Q96RF0 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SNX18Q96RF0 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 CDY7P-201ENST00000429883 1604 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 AC078880.4-201ENST00000617627 1749 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 KYNUP1-201ENST00000466683 1406 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 NRIR-201ENST00000366140 799 ntTSL 3 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 AL451142.1-201ENST00000375867 775 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 SNORA51.7-201ENST00000384171 134 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 AC121334.1-201ENST00000396414 802 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 AC009299.1-201ENST00000429684 717 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 MAPRE1P3-201ENST00000435438 796 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 AL731892.1-201ENST00000437364 1192 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 AL451074.4-201ENST00000447545 470 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 AC092421.1-201ENST00000448148 418 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 RPS18P13-201ENST00000461260 454 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 AC018635.1-201ENST00000468292 1030 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 RN7SL228P-201ENST00000470060 303 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 AC079944.1-201ENST00000485426 495 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 PABPC1P1-201ENST00000506347 591 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 OR7E83P-201ENST00000511021 970 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 OR7E2P-201ENST00000533071 889 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 AC011611.6-201ENST00000547483 255 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms