Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 RN7SL104P-201ENST00000498686 293 ntBASIC8.83□□□□□ -1
COL22A1Q8NFW1 AC114781.3-201ENST00000512083 142 ntBASIC8.83□□□□□ -1
COL22A1Q8NFW1 OR5H7P-201ENST00000514084 930 ntBASIC8.83□□□□□ -1
COL22A1Q8NFW1 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 AP006245.2-201ENST00000522004 300 ntBASIC8.83□□□□□ -1
COL22A1Q8NFW1 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 AL512652.1-201ENST00000619006 500 ntBASIC8.83□□□□□ -1
COL22A1Q8NFW1 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 AL136984.1-201ENST00000607611 1893 ntBASIC8.83□□□□□ -1
COL22A1Q8NFW1 ALDH1L2-201ENST00000258494 7547 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 HSPD1P9-201ENST00000420325 1636 ntBASIC8.83□□□□□ -1
COL22A1Q8NFW1 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 RNU1-150P-201ENST00000362491 162 ntBASIC8.83□□□□□ -1
COL22A1Q8NFW1 VTRNA3-1P-201ENST00000362552 102 ntBASIC8.83□□□□□ -1
COL22A1Q8NFW1 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 AC002553.3-201ENST00000453002 341 ntBASIC8.83□□□□□ -1
COL22A1Q8NFW1 RPL23AP64-201ENST00000469465 435 ntBASIC8.83□□□□□ -1
COL22A1Q8NFW1 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 RN7SL208P-201ENST00000577964 296 ntBASIC8.83□□□□□ -1
COL22A1Q8NFW1 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 AC026367.2-201ENST00000610630 553 ntBASIC8.83□□□□□ -1
COL22A1Q8NFW1 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC8.83□□□□□ -1
COL22A1Q8NFW1 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC8.83□□□□□ -1
COL22A1Q8NFW1 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
COL22A1Q8NFW1 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
COL22A1Q8NFW1 AC145138.1-201ENST00000512908 2851 ntBASIC8.82□□□□□ -1
COL22A1Q8NFW1 SCRN1-201ENST00000242059 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
COL22A1Q8NFW1 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
COL22A1Q8NFW1 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC8.82□□□□□ -1
COL22A1Q8NFW1 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC8.82□□□□□ -1
COL22A1Q8NFW1 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC8.82□□□□□ -1
COL22A1Q8NFW1 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
COL22A1Q8NFW1 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
COL22A1Q8NFW1 SFTPD-AS1-201ENST00000608229 5001 ntBASIC8.82□□□□□ -1
COL22A1Q8NFW1 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC8.82□□□□□ -1
COL22A1Q8NFW1 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
COL22A1Q8NFW1 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC8.82□□□□□ -1
COL22A1Q8NFW1 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC8.82□□□□□ -1
COL22A1Q8NFW1 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
COL22A1Q8NFW1 IREB2-208ENST00000560440 4396 ntTSL 1 (best) BASIC8.82□□□□□ -1
COL22A1Q8NFW1 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
COL22A1Q8NFW1 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC8.82□□□□□ -1
COL22A1Q8NFW1 AC017035.1-201ENST00000411999 1115 ntBASIC8.82□□□□□ -1
COL22A1Q8NFW1 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC8.82□□□□□ -1
COL22A1Q8NFW1 CRYGGP-201ENST00000443337 145 ntBASIC8.82□□□□□ -1
COL22A1Q8NFW1 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC8.82□□□□□ -1
COL22A1Q8NFW1 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC8.82□□□□□ -1
COL22A1Q8NFW1 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC8.82□□□□□ -1
COL22A1Q8NFW1 AL136295.6-201ENST00000610486 658 ntBASIC8.82□□□□□ -1
COL22A1Q8NFW1 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC8.82□□□□□ -1
COL22A1Q8NFW1 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
COL22A1Q8NFW1 EIF3EP1-201ENST00000433978 1316 ntBASIC8.82□□□□□ -1
COL22A1Q8NFW1 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
COL22A1Q8NFW1 TP53BP1-210ENST00000450115 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
COL22A1Q8NFW1 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC8.82□□□□□ -1
COL22A1Q8NFW1 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC8.82□□□□□ -1
COL22A1Q8NFW1 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC8.82□□□□□ -1
COL22A1Q8NFW1 CASC19-238ENST00000641523 1558 ntBASIC8.82□□□□□ -1
COL22A1Q8NFW1 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC8.81□□□□□ -1
COL22A1Q8NFW1 SYNJ1-202ENST00000382491 6958 ntTSL 5 BASIC8.81□□□□□ -1
COL22A1Q8NFW1 MIPOL1-202ENST00000396294 6258 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
COL22A1Q8NFW1 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC8.81□□□□□ -1
COL22A1Q8NFW1 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC8.81□□□□□ -1
COL22A1Q8NFW1 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
COL22A1Q8NFW1 RPL7AP14-201ENST00000424041 802 ntBASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms