Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.18□□□□□ -1.42
SOX2P48431 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC6.18□□□□□ -1.42
SOX2P48431 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX2P48431 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC6.18□□□□□ -1.42
SOX2P48431 AC087575.1-201ENST00000585087 229 ntBASIC6.18□□□□□ -1.42
SOX2P48431 BNIP3P27-201ENST00000599991 412 ntBASIC6.18□□□□□ -1.42
SOX2P48431 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC6.18□□□□□ -1.42
SOX2P48431 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SOX2P48431 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX2P48431 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX2P48431 AC135068.4-201ENST00000622949 925 ntBASIC6.18□□□□□ -1.42
SOX2P48431 AC090099.1-204ENST00000623626 849 ntBASIC6.18□□□□□ -1.42
SOX2P48431 AC004943.1-203ENST00000624370 1074 ntBASIC6.18□□□□□ -1.42
SOX2P48431 AC069542.2-201ENST00000624816 216 ntBASIC6.18□□□□□ -1.42
SOX2P48431 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.18□□□□□ -1.42
SOX2P48431 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX2P48431 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.18□□□□□ -1.42
SOX2P48431 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX2P48431 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX2P48431 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX2P48431 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
SOX2P48431 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.18□□□□□ -1.42
SOX2P48431 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SOX2P48431 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX2P48431 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX2P48431 PABPC1P8-201ENST00000452851 2086 ntBASIC6.18□□□□□ -1.42
SOX2P48431 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX2P48431 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX2P48431 ASNSP6-201ENST00000592770 1618 ntBASIC6.17□□□□□ -1.42
SOX2P48431 MAPK10-344ENST00000641718 3746 ntBASIC6.17□□□□□ -1.42
SOX2P48431 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.17□□□□□ -1.42
SOX2P48431 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SOX2P48431 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
SOX2P48431 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.17□□□□□ -1.42
SOX2P48431 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX2P48431 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SOX2P48431 BRD7P1-201ENST00000557705 1915 ntBASIC6.17□□□□□ -1.42
SOX2P48431 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX2P48431 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SOX2P48431 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.17□□□□□ -1.42
SOX2P48431 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.17□□□□□ -1.42
SOX2P48431 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX2P48431 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
SOX2P48431 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX2P48431 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.17□□□□□ -1.42
SOX2P48431 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SOX2P48431 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX2P48431 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX2P48431 UBE2D3-205ENST00000350435 711 ntTSL 2 BASIC6.17□□□□□ -1.42
SOX2P48431 Y_RNA.62-201ENST00000362840 99 ntBASIC6.17□□□□□ -1.42
SOX2P48431 RNU6-1017P-201ENST00000363613 106 ntBASIC6.17□□□□□ -1.42
SOX2P48431 RNA5SP260-201ENST00000363849 111 ntBASIC6.17□□□□□ -1.42
SOX2P48431 RN7SKP107-201ENST00000364157 290 ntBASIC6.17□□□□□ -1.42
SOX2P48431 SNORA70.8-201ENST00000384231 136 ntBASIC6.17□□□□□ -1.42
SOX2P48431 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX2P48431 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SOX2P48431 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX2P48431 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX2P48431 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC6.17□□□□□ -1.42
SOX2P48431 AL390840.1-201ENST00000420303 988 ntBASIC6.17□□□□□ -1.42
SOX2P48431 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC6.17□□□□□ -1.42
SOX2P48431 UQCRHP1-204ENST00000424609 274 ntBASIC6.17□□□□□ -1.42
SOX2P48431 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC6.17□□□□□ -1.42
SOX2P48431 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SOX2P48431 AC130472.1-201ENST00000427885 309 ntBASIC6.17□□□□□ -1.42
SOX2P48431 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.17□□□□□ -1.42
SOX2P48431 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC6.17□□□□□ -1.42
SOX2P48431 AC013410.1-201ENST00000436223 1232 ntBASIC6.17□□□□□ -1.42
SOX2P48431 RPS10P3-201ENST00000439253 494 ntBASIC6.17□□□□□ -1.42
SOX2P48431 OR52U1P-201ENST00000439752 923 ntBASIC6.17□□□□□ -1.42
SOX2P48431 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.17□□□□□ -1.42
SOX2P48431 PMS2P9-201ENST00000441237 515 ntBASIC6.17□□□□□ -1.42
SOX2P48431 AL158053.1-201ENST00000441503 453 ntBASIC6.17□□□□□ -1.42
SOX2P48431 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX2P48431 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX2P48431 AC008026.1-201ENST00000460492 447 ntBASIC6.17□□□□□ -1.42
SOX2P48431 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SOX2P48431 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX2P48431 AC104629.1-201ENST00000494226 508 ntBASIC6.17□□□□□ -1.42
SOX2P48431 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC6.17□□□□□ -1.42
SOX2P48431 AC006070.1-201ENST00000508151 193 ntBASIC6.17□□□□□ -1.42
SOX2P48431 OR7E83P-201ENST00000511021 970 ntBASIC6.17□□□□□ -1.42
SOX2P48431 OR51A1P-201ENST00000511110 946 ntBASIC6.17□□□□□ -1.42
SOX2P48431 RNA5SP422-201ENST00000516778 111 ntBASIC6.17□□□□□ -1.42
SOX2P48431 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SOX2P48431 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC6.17□□□□□ -1.42
SOX2P48431 OR7E154P-201ENST00000525174 932 ntBASIC6.17□□□□□ -1.42
SOX2P48431 OR4A21P-201ENST00000532759 944 ntBASIC6.17□□□□□ -1.42
SOX2P48431 AC016144.1-201ENST00000548175 1087 ntBASIC6.17□□□□□ -1.42
SOX2P48431 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX2P48431 TUBAP4-201ENST00000569261 416 ntBASIC6.17□□□□□ -1.42
SOX2P48431 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX2P48431 AC136944.5-201ENST00000573021 151 ntBASIC6.17□□□□□ -1.42
SOX2P48431 RN7SL667P-201ENST00000582817 298 ntBASIC6.17□□□□□ -1.42
SOX2P48431 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX2P48431 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.17□□□□□ -1.42
SOX2P48431 DNAJC19P3-201ENST00000594491 331 ntBASIC6.17□□□□□ -1.42
SOX2P48431 AC040174.2-201ENST00000602701 465 ntBASIC6.17□□□□□ -1.42
SOX2P48431 AC017076.1-201ENST00000607613 578 ntBASIC6.17□□□□□ -1.42
SOX2P48431 AC063962.1-201ENST00000608199 521 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms