Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
NCK1P16333 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.4□□□□□ -1.39
NCK1P16333 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.4□□□□□ -1.39
NCK1P16333 ZNF658B-201ENST00000602828 3408 ntBASIC6.4□□□□□ -1.39
NCK1P16333 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NCK1P16333 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
NCK1P16333 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NCK1P16333 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NCK1P16333 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NCK1P16333 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.39□□□□□ -1.39
NCK1P16333 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NCK1P16333 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NCK1P16333 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NCK1P16333 AC011504.1-201ENST00000623331 4103 ntBASIC6.39□□□□□ -1.39
NCK1P16333 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NCK1P16333 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
NCK1P16333 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NCK1P16333 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NCK1P16333 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC6.39□□□□□ -1.39
NCK1P16333 TRGV5P-201ENST00000419915 354 ntBASIC6.39□□□□□ -1.39
NCK1P16333 GAPDHP55-201ENST00000423136 803 ntBASIC6.39□□□□□ -1.39
NCK1P16333 CHCHD3P1-201ENST00000425516 676 ntBASIC6.39□□□□□ -1.39
NCK1P16333 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC6.39□□□□□ -1.39
NCK1P16333 ARMC8P1-201ENST00000443069 1289 ntBASIC6.39□□□□□ -1.39
NCK1P16333 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.39□□□□□ -1.39
NCK1P16333 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.39□□□□□ -1.39
NCK1P16333 AL139156.3-201ENST00000454802 394 ntBASIC6.39□□□□□ -1.39
NCK1P16333 RPLP0P1-201ENST00000457002 361 ntBASIC6.39□□□□□ -1.39
NCK1P16333 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.39□□□□□ -1.39
NCK1P16333 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NCK1P16333 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.39□□□□□ -1.39
NCK1P16333 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
NCK1P16333 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC6.39□□□□□ -1.39
NCK1P16333 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.39□□□□□ -1.39
NCK1P16333 IGLVV-66-201ENST00000523818 341 ntBASIC6.39□□□□□ -1.39
NCK1P16333 AC007537.1-201ENST00000539347 327 ntBASIC6.39□□□□□ -1.39
NCK1P16333 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.39□□□□□ -1.39
NCK1P16333 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.39□□□□□ -1.39
NCK1P16333 AP001120.4-201ENST00000590231 108 ntBASIC6.39□□□□□ -1.39
NCK1P16333 AC091193.1-201ENST00000604640 448 ntBASIC6.39□□□□□ -1.39
NCK1P16333 AC068234.2-201ENST00000619646 522 ntBASIC6.39□□□□□ -1.39
NCK1P16333 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.39□□□□□ -1.39
NCK1P16333 FGL2-202ENST00000637771 989 ntBASIC6.39□□□□□ -1.39
NCK1P16333 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NCK1P16333 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
NCK1P16333 AL117378.2-201ENST00000622916 1337 ntBASIC6.39□□□□□ -1.39
NCK1P16333 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.39□□□□□ -1.39
NCK1P16333 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.39□□□□□ -1.39
NCK1P16333 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
NCK1P16333 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NCK1P16333 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
NCK1P16333 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.39□□□□□ -1.39
NCK1P16333 AL449283.1-201ENST00000602631 3403 ntBASIC6.39□□□□□ -1.39
NCK1P16333 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
NCK1P16333 MKI67P1-201ENST00000604297 1460 ntBASIC6.39□□□□□ -1.39
NCK1P16333 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NCK1P16333 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NCK1P16333 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NCK1P16333 AL731556.1-201ENST00000394628 3711 ntBASIC6.39□□□□□ -1.39
NCK1P16333 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NCK1P16333 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.39□□□□□ -1.39
NCK1P16333 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NCK1P16333 AC007012.2-201ENST00000623206 1676 ntBASIC6.39□□□□□ -1.39
NCK1P16333 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NCK1P16333 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NCK1P16333 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.38□□□□□ -1.39
NCK1P16333 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NCK1P16333 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NCK1P16333 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NCK1P16333 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
NCK1P16333 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.38□□□□□ -1.39
NCK1P16333 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NCK1P16333 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
NCK1P16333 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NCK1P16333 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.38□□□□□ -1.39
NCK1P16333 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NCK1P16333 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NCK1P16333 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
NCK1P16333 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NCK1P16333 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NCK1P16333 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.38□□□□□ -1.39
NCK1P16333 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC6.38□□□□□ -1.39
NCK1P16333 RPSAP1-201ENST00000421328 880 ntBASIC6.38□□□□□ -1.39
NCK1P16333 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NCK1P16333 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC6.38□□□□□ -1.39
NCK1P16333 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.38□□□□□ -1.39
NCK1P16333 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC6.38□□□□□ -1.39
NCK1P16333 AC079594.1-201ENST00000489757 331 ntBASIC6.38□□□□□ -1.39
NCK1P16333 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.38□□□□□ -1.39
NCK1P16333 KCTD9P4-201ENST00000526766 1166 ntBASIC6.38□□□□□ -1.39
NCK1P16333 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.38□□□□□ -1.39
NCK1P16333 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC6.38□□□□□ -1.39
NCK1P16333 COX6CP11-201ENST00000555293 229 ntBASIC6.38□□□□□ -1.39
NCK1P16333 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
NCK1P16333 RN7SL126P-201ENST00000616400 299 ntBASIC6.38□□□□□ -1.39
NCK1P16333 AC243830.3-201ENST00000616810 376 ntBASIC6.38□□□□□ -1.39
NCK1P16333 AC012653.2-201ENST00000621880 420 ntBASIC6.38□□□□□ -1.39
NCK1P16333 AC012100.3-201ENST00000624738 575 ntBASIC6.38□□□□□ -1.39
NCK1P16333 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NCK1P16333 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms