Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RN7SKP11-201ENST00000517018 287 ntBASIC7.26□□□□□ -1.25
APOEP02649 IGLC4-201ENST00000517690 248 ntBASIC7.26□□□□□ -1.25
APOEP02649 OR7E154P-201ENST00000525174 932 ntBASIC7.26□□□□□ -1.25
APOEP02649 AC021820.1-201ENST00000525564 808 ntBASIC7.26□□□□□ -1.25
APOEP02649 AC130366.1-201ENST00000526505 1192 ntBASIC7.26□□□□□ -1.25
APOEP02649 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC7.26□□□□□ -1.25
APOEP02649 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.26□□□□□ -1.25
APOEP02649 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.26□□□□□ -1.25
APOEP02649 AC103968.1-201ENST00000557841 573 ntBASIC7.26□□□□□ -1.25
APOEP02649 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
APOEP02649 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.26□□□□□ -1.25
APOEP02649 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.26□□□□□ -1.25
APOEP02649 AC005355.2-201ENST00000625064 484 ntBASIC7.26□□□□□ -1.25
APOEP02649 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC7.26□□□□□ -1.25
APOEP02649 AC011471.4-201ENST00000638271 216 ntBASIC7.26□□□□□ -1.25
APOEP02649 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
APOEP02649 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
APOEP02649 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
APOEP02649 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.26□□□□□ -1.25
APOEP02649 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
APOEP02649 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.26□□□□□ -1.25
APOEP02649 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
APOEP02649 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC7.25□□□□□ -1.25
APOEP02649 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.25□□□□□ -1.25
APOEP02649 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
APOEP02649 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
APOEP02649 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.25□□□□□ -1.25
APOEP02649 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
APOEP02649 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.25□□□□□ -1.25
APOEP02649 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.25□□□□□ -1.25
APOEP02649 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
APOEP02649 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
APOEP02649 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
APOEP02649 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
APOEP02649 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7.25□□□□□ -1.25
APOEP02649 HNRNPH1P2-201ENST00000396845 1210 ntBASIC7.25□□□□□ -1.25
APOEP02649 ZNF37CP-201ENST00000406795 241 ntBASIC7.25□□□□□ -1.25
APOEP02649 RN7SKP148-201ENST00000410179 275 ntBASIC7.25□□□□□ -1.25
APOEP02649 AC091492.1-201ENST00000419844 272 ntBASIC7.25□□□□□ -1.25
APOEP02649 YWHAZP5-201ENST00000419975 730 ntBASIC7.25□□□□□ -1.25
APOEP02649 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
APOEP02649 LSM3P3-201ENST00000436601 306 ntBASIC7.25□□□□□ -1.25
APOEP02649 RPS14P8-201ENST00000478778 369 ntBASIC7.25□□□□□ -1.25
APOEP02649 AC095057.1-201ENST00000507583 168 ntBASIC7.25□□□□□ -1.25
APOEP02649 CARSP2-201ENST00000520688 277 ntBASIC7.25□□□□□ -1.25
APOEP02649 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.25□□□□□ -1.25
APOEP02649 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.25□□□□□ -1.25
APOEP02649 LDHC-204ENST00000536880 957 ntTSL 5 BASIC7.25□□□□□ -1.25
APOEP02649 AL135978.1-201ENST00000553618 1266 ntBASIC7.25□□□□□ -1.25
APOEP02649 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC7.25□□□□□ -1.25
APOEP02649 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.25□□□□□ -1.25
APOEP02649 AC244034.2-201ENST00000562504 509 ntBASIC7.25□□□□□ -1.25
APOEP02649 EIF4A3P1-201ENST00000578499 647 ntBASIC7.25□□□□□ -1.25
APOEP02649 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC7.25□□□□□ -1.25
APOEP02649 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.25□□□□□ -1.25
APOEP02649 MIR378H-201ENST00000579966 83 ntBASIC7.25□□□□□ -1.25
APOEP02649 OR7E19P-202ENST00000589942 844 ntBASIC7.25□□□□□ -1.25
APOEP02649 AP005212.3-201ENST00000619964 528 ntBASIC7.25□□□□□ -1.25
APOEP02649 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.25□□□□□ -1.25
APOEP02649 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
APOEP02649 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.25□□□□□ -1.25
APOEP02649 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
APOEP02649 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.25□□□□□ -1.25
APOEP02649 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
APOEP02649 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
APOEP02649 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.24□□□□□ -1.25
APOEP02649 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
APOEP02649 LCOR-201ENST00000286067 4542 ntBASIC7.24□□□□□ -1.25
APOEP02649 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
APOEP02649 AC122713.2-201ENST00000624942 3335 ntBASIC7.24□□□□□ -1.25
APOEP02649 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.24□□□□□ -1.25
APOEP02649 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.24□□□□□ -1.25
APOEP02649 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
APOEP02649 MAPK10-383ENST00000642032 3390 ntBASIC7.24□□□□□ -1.25
APOEP02649 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
APOEP02649 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
APOEP02649 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
APOEP02649 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
APOEP02649 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
APOEP02649 AC102941.1-201ENST00000567616 1537 ntBASIC7.24□□□□□ -1.25
APOEP02649 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.24□□□□□ -1.25
APOEP02649 RPL12P13-201ENST00000310055 497 ntBASIC7.24□□□□□ -1.25
APOEP02649 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.24□□□□□ -1.25
APOEP02649 MIR99A-201ENST00000384906 81 ntBASIC7.24□□□□□ -1.25
APOEP02649 EEF1GP6-201ENST00000402309 905 ntBASIC7.24□□□□□ -1.25
APOEP02649 AC018804.1-201ENST00000430381 618 ntBASIC7.24□□□□□ -1.25
APOEP02649 HMGN1P6-201ENST00000438508 291 ntBASIC7.24□□□□□ -1.25
APOEP02649 RPS19P6-201ENST00000441327 433 ntBASIC7.24□□□□□ -1.25
APOEP02649 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
APOEP02649 AL354714.5-201ENST00000450131 590 ntBASIC7.24□□□□□ -1.25
APOEP02649 RN7SL492P-201ENST00000460700 295 ntBASIC7.24□□□□□ -1.25
APOEP02649 RPS26P11-201ENST00000463445 348 ntBASIC7.24□□□□□ -1.25
APOEP02649 RPS26P6-201ENST00000475156 348 ntBASIC7.24□□□□□ -1.25
APOEP02649 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.24□□□□□ -1.25
APOEP02649 AC007537.1-201ENST00000539347 327 ntBASIC7.24□□□□□ -1.25
APOEP02649 AC069240.2-201ENST00000550242 609 ntBASIC7.24□□□□□ -1.25
APOEP02649 MIR4428-201ENST00000584884 73 ntBASIC7.24□□□□□ -1.25
APOEP02649 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.24□□□□□ -1.25
APOEP02649 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC7.24□□□□□ -1.25
APOEP02649 AC013731.1-201ENST00000604340 883 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms