Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNX18Q96RF0 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SNX18Q96RF0 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 RBMX2P2-201ENST00000257020 946 ntBASIC6.56□□□□□ -1.36
SNX18Q96RF0 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNX18Q96RF0 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SNX18Q96RF0 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNX18Q96RF0 HMGB3P1-201ENST00000393368 573 ntBASIC6.56□□□□□ -1.36
SNX18Q96RF0 SUMO2P13-201ENST00000403109 272 ntBASIC6.56□□□□□ -1.36
SNX18Q96RF0 SNORA3.1-201ENST00000408166 111 ntBASIC6.56□□□□□ -1.36
SNX18Q96RF0 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SNX18Q96RF0 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 RPL17P35-201ENST00000432217 549 ntBASIC6.56□□□□□ -1.36
SNX18Q96RF0 AC104698.1-201ENST00000435671 276 ntBASIC6.56□□□□□ -1.36
SNX18Q96RF0 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 RPSAP49-201ENST00000445182 886 ntBASIC6.56□□□□□ -1.36
SNX18Q96RF0 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNX18Q96RF0 RN7SL308P-201ENST00000464971 297 ntBASIC6.56□□□□□ -1.36
SNX18Q96RF0 AC018475.1-201ENST00000478358 465 ntBASIC6.56□□□□□ -1.36
SNX18Q96RF0 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 AC106800.2-201ENST00000514009 1103 ntBASIC6.56□□□□□ -1.36
SNX18Q96RF0 RN7SKP157-201ENST00000516174 282 ntBASIC6.56□□□□□ -1.36
SNX18Q96RF0 AC090539.2-201ENST00000523425 671 ntBASIC6.56□□□□□ -1.36
SNX18Q96RF0 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 AC135626.1-201ENST00000556983 435 ntBASIC6.56□□□□□ -1.36
SNX18Q96RF0 AC133569.1-201ENST00000564327 373 ntBASIC6.56□□□□□ -1.36
SNX18Q96RF0 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 AC091304.5-201ENST00000568969 158 ntBASIC6.56□□□□□ -1.36
SNX18Q96RF0 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 AC008147.4-201ENST00000617570 1204 ntBASIC6.56□□□□□ -1.36
SNX18Q96RF0 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 AC022919.1-201ENST00000624979 626 ntBASIC6.56□□□□□ -1.36
SNX18Q96RF0 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SNX18Q96RF0 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SNX18Q96RF0 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
SNX18Q96RF0 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SNX18Q96RF0 AC007993.1-201ENST00000621298 2430 ntBASIC6.56□□□□□ -1.36
SNX18Q96RF0 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SNX18Q96RF0 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SNX18Q96RF0 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNX18Q96RF0 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNX18Q96RF0 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNX18Q96RF0 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 AL391261.1-201ENST00000555712 1479 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNX18Q96RF0 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNX18Q96RF0 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SNX18Q96RF0 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNX18Q96RF0 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SNX18Q96RF0 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SNX18Q96RF0 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNX18Q96RF0 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SNX18Q96RF0 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 RN7SKP36-201ENST00000363997 312 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 RNU1-16P-201ENST00000365477 164 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNX18Q96RF0 RNA5SP231-201ENST00000410496 138 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 SETP22-201ENST00000412243 957 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 AC009413.1-201ENST00000414823 399 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 EEF1GP7-201ENST00000422983 703 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 GSTA6P-201ENST00000424144 582 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.55□□□□□ -1.36
SNX18Q96RF0 RPSAP62-201ENST00000432596 833 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 OR52U1P-201ENST00000439752 923 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 RPL24P8-201ENST00000446071 474 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 BZW1P1-201ENST00000454901 1240 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 AC004692.1-201ENST00000455430 424 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 AC022730.2-201ENST00000465359 452 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 RN7SL549P-201ENST00000478997 282 ntBASIC6.55□□□□□ -1.36
SNX18Q96RF0 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms