Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
AP3S2P59780 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
AP3S2P59780 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.83□□□□□ -1.48
AP3S2P59780 DDX50P1-201ENST00000438163 2400 ntBASIC5.83□□□□□ -1.48
AP3S2P59780 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
AP3S2P59780 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
AP3S2P59780 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.82□□□□□ -1.48
AP3S2P59780 EEF1A1P15-201ENST00000395772 1408 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
AP3S2P59780 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC5.82□□□□□ -1.48
AP3S2P59780 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.82□□□□□ -1.48
AP3S2P59780 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC5.82□□□□□ -1.48
AP3S2P59780 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
AP3S2P59780 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
AP3S2P59780 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
AP3S2P59780 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
AP3S2P59780 AC011504.1-201ENST00000623331 4103 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
AP3S2P59780 C12orf45-201ENST00000280749 459 ntTSL 3 BASIC5.82□□□□□ -1.48
AP3S2P59780 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.82□□□□□ -1.48
AP3S2P59780 TNNT3-202ENST00000344578 794 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
AP3S2P59780 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
AP3S2P59780 RNU1-47P-201ENST00000362966 163 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 SNORA73B-201ENST00000363217 204 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 RN7SKP211-201ENST00000363328 315 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 RNA5SP472-201ENST00000363868 119 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 RNA5SP442-201ENST00000365050 107 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 TNNT3-205ENST00000381563 844 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
AP3S2P59780 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
AP3S2P59780 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
AP3S2P59780 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
AP3S2P59780 HMGB3P1-201ENST00000393368 573 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 AL360271.1-201ENST00000395679 510 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 RPSAP42-201ENST00000403415 878 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 AL031229.1-201ENST00000404273 224 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 OR13D3P-201ENST00000412501 937 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.82□□□□□ -1.48
AP3S2P59780 FTOP1-201ENST00000419363 861 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 ELF5-203ENST00000429939 637 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
AP3S2P59780 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.82□□□□□ -1.48
AP3S2P59780 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC5.82□□□□□ -1.48
AP3S2P59780 LINC02474-202ENST00000441160 1148 ntTSL 5 BASIC5.82□□□□□ -1.48
AP3S2P59780 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC5.82□□□□□ -1.48
AP3S2P59780 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.82□□□□□ -1.48
AP3S2P59780 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
AP3S2P59780 AL590004.3-201ENST00000450255 443 ntTSL 5 BASIC5.82□□□□□ -1.48
AP3S2P59780 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC5.82□□□□□ -1.48
AP3S2P59780 NDUFB11P1-201ENST00000455818 465 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 MARK2P8-201ENST00000476069 952 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 AL031073.1-201ENST00000503029 1139 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.82□□□□□ -1.48
AP3S2P59780 AC024022.1-203ENST00000515392 478 ntTSL 3 BASIC5.82□□□□□ -1.48
AP3S2P59780 IGHV3-57-201ENST00000520143 280 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 AC008514.1-201ENST00000521965 602 ntTSL 3 BASIC5.82□□□□□ -1.48
AP3S2P59780 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC5.82□□□□□ -1.48
AP3S2P59780 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC5.82□□□□□ -1.48
AP3S2P59780 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
AP3S2P59780 MIR4642-201ENST00000583943 82 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 AL137190.1-201ENST00000603288 282 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 AC008626.1-201ENST00000604384 255 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.82□□□□□ -1.48
AP3S2P59780 MIR6761-201ENST00000617899 72 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 AC005393.1-201ENST00000617916 584 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
AP3S2P59780 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC5.82□□□□□ -1.48
AP3S2P59780 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 AP000550.3-201ENST00000637734 379 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
AP3S2P59780 AL139254.2-202ENST00000641937 1156 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.82□□□□□ -1.48
AP3S2P59780 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
AP3S2P59780 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
AP3S2P59780 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
AP3S2P59780 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.82□□□□□ -1.48
AP3S2P59780 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
AP3S2P59780 AC020658.2-201ENST00000559030 4020 ntBASIC5.82□□□□□ -1.48
AP3S2P59780 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
AP3S2P59780 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.82□□□□□ -1.48
AP3S2P59780 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
AP3S2P59780 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
AP3S2P59780 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.81□□□□□ -1.48
AP3S2P59780 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
AP3S2P59780 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
AP3S2P59780 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
AP3S2P59780 AL132656.3-201ENST00000606384 1595 ntBASIC5.81□□□□□ -1.48
AP3S2P59780 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
AP3S2P59780 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
AP3S2P59780 LDHB-201ENST00000350669 1303 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
AP3S2P59780 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC5.81□□□□□ -1.48
AP3S2P59780 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC5.81□□□□□ -1.48
AP3S2P59780 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
AP3S2P59780 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
AP3S2P59780 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
AP3S2P59780 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
AP3S2P59780 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
AP3S2P59780 MIR654-201ENST00000385199 81 ntBASIC5.81□□□□□ -1.48
AP3S2P59780 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC5.81□□□□□ -1.48
AP3S2P59780 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC5.81□□□□□ -1.48
AP3S2P59780 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
AP3S2P59780 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms