Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL15A1P39059 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL15A1P39059 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
COL15A1P39059 RNA5SP321-201ENST00000362722 111 ntBASIC8.66□□□□□ -1.02
COL15A1P39059 RN7SKP47-201ENST00000365347 328 ntBASIC8.66□□□□□ -1.02
COL15A1P39059 RNA5SP279-201ENST00000365513 117 ntBASIC8.66□□□□□ -1.02
COL15A1P39059 PKIB-203ENST00000368446 556 ntTSL 2 BASIC8.66□□□□□ -1.02
COL15A1P39059 RNA5SP474-201ENST00000391234 90 ntBASIC8.66□□□□□ -1.02
COL15A1P39059 AL773545.3-201ENST00000414297 706 ntBASIC8.66□□□□□ -1.02
COL15A1P39059 VN1R3-201ENST00000418822 919 ntBASIC8.66□□□□□ -1.02
COL15A1P39059 GPN3P1-201ENST00000423883 535 ntBASIC8.66□□□□□ -1.02
COL15A1P39059 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC8.66□□□□□ -1.02
COL15A1P39059 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC8.66□□□□□ -1.02
COL15A1P39059 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC8.66□□□□□ -1.02
COL15A1P39059 UBBP5-201ENST00000446970 266 ntBASIC8.66□□□□□ -1.02
COL15A1P39059 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC8.66□□□□□ -1.02
COL15A1P39059 RPS4XP23-201ENST00000487801 237 ntBASIC8.66□□□□□ -1.02
COL15A1P39059 SLC25A14P1-201ENST00000502867 901 ntBASIC8.66□□□□□ -1.02
COL15A1P39059 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
COL15A1P39059 LDHBP3-201ENST00000514909 822 ntBASIC8.66□□□□□ -1.02
COL15A1P39059 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC8.66□□□□□ -1.02
COL15A1P39059 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC8.66□□□□□ -1.02
COL15A1P39059 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC8.66□□□□□ -1.02
COL15A1P39059 AC091133.5-201ENST00000603088 301 ntBASIC8.66□□□□□ -1.02
COL15A1P39059 AC116631.1-202ENST00000640984 683 ntBASIC8.66□□□□□ -1.02
COL15A1P39059 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
COL15A1P39059 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC8.66□□□□□ -1.02
COL15A1P39059 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC8.66□□□□□ -1.02
COL15A1P39059 TMC3-AS1-206ENST00000612811 2726 ntBASIC8.66□□□□□ -1.02
COL15A1P39059 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
COL15A1P39059 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
COL15A1P39059 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC8.66□□□□□ -1.02
COL15A1P39059 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL15A1P39059 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC8.66□□□□□ -1.02
COL15A1P39059 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL15A1P39059 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL15A1P39059 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
COL15A1P39059 AC132219.2-201ENST00000624416 2327 ntBASIC8.65□□□□□ -1.02
COL15A1P39059 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
COL15A1P39059 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
COL15A1P39059 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
COL15A1P39059 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
COL15A1P39059 RNA5SP198-201ENST00000410376 127 ntBASIC8.65□□□□□ -1.02
COL15A1P39059 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC8.65□□□□□ -1.02
COL15A1P39059 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC8.65□□□□□ -1.02
COL15A1P39059 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC8.65□□□□□ -1.02
COL15A1P39059 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
COL15A1P39059 AL389925.1-201ENST00000432257 728 ntBASIC8.65□□□□□ -1.02
COL15A1P39059 AL645939.3-201ENST00000435408 225 ntBASIC8.65□□□□□ -1.02
COL15A1P39059 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC8.65□□□□□ -1.02
COL15A1P39059 H3F3AP5-201ENST00000475267 429 ntBASIC8.65□□□□□ -1.02
COL15A1P39059 RN7SL187P-201ENST00000495587 303 ntBASIC8.65□□□□□ -1.02
COL15A1P39059 AC091849.1-201ENST00000509920 121 ntBASIC8.65□□□□□ -1.02
COL15A1P39059 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC8.65□□□□□ -1.02
COL15A1P39059 AC060766.1-201ENST00000590824 627 ntBASIC8.65□□□□□ -1.02
COL15A1P39059 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC8.65□□□□□ -1.02
COL15A1P39059 SNORA16A-202ENST00000628458 135 ntBASIC8.65□□□□□ -1.02
COL15A1P39059 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
COL15A1P39059 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC8.65□□□□□ -1.02
COL15A1P39059 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
COL15A1P39059 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
COL15A1P39059 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
COL15A1P39059 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC8.65□□□□□ -1.02
COL15A1P39059 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC8.65□□□□□ -1.02
COL15A1P39059 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
COL15A1P39059 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
COL15A1P39059 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
COL15A1P39059 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC8.65□□□□□ -1.03
COL15A1P39059 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
COL15A1P39059 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.65□□□□□ -1.03
COL15A1P39059 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC8.64□□□□□ -1.03
COL15A1P39059 AC034111.1-201ENST00000562143 3770 ntBASIC8.64□□□□□ -1.03
COL15A1P39059 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
COL15A1P39059 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
COL15A1P39059 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
COL15A1P39059 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC8.64□□□□□ -1.03
COL15A1P39059 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
COL15A1P39059 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC8.64□□□□□ -1.03
COL15A1P39059 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC8.64□□□□□ -1.03
COL15A1P39059 GAPDHP59-201ENST00000435908 267 ntBASIC8.64□□□□□ -1.03
COL15A1P39059 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC8.64□□□□□ -1.03
COL15A1P39059 HBG2-204ENST00000444587 307 ntTSL 2 BASIC8.64□□□□□ -1.03
COL15A1P39059 POU5F1P5-201ENST00000445059 658 ntBASIC8.64□□□□□ -1.03
COL15A1P39059 RPS14P8-201ENST00000478778 369 ntBASIC8.64□□□□□ -1.03
COL15A1P39059 AC021006.1-201ENST00000489849 553 ntBASIC8.64□□□□□ -1.03
COL15A1P39059 AC117500.1-201ENST00000497352 755 ntBASIC8.64□□□□□ -1.03
COL15A1P39059 AC112484.3-201ENST00000505910 329 ntBASIC8.64□□□□□ -1.03
COL15A1P39059 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC8.64□□□□□ -1.03
COL15A1P39059 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC8.64□□□□□ -1.03
COL15A1P39059 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC8.64□□□□□ -1.03
COL15A1P39059 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC8.64□□□□□ -1.03
COL15A1P39059 NDUFA5P11-201ENST00000567995 343 ntBASIC8.64□□□□□ -1.03
COL15A1P39059 AL365223.1-201ENST00000574864 1297 ntBASIC8.64□□□□□ -1.03
COL15A1P39059 AC097641.3-201ENST00000613523 464 ntBASIC8.64□□□□□ -1.03
COL15A1P39059 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC8.64□□□□□ -1.03
COL15A1P39059 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC8.64□□□□□ -1.03
COL15A1P39059 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
COL15A1P39059 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
COL15A1P39059 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
COL15A1P39059 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms