Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC8.19□□□□□ -1.1
CNGA1P29973 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CNGA1P29973 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CNGA1P29973 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CNGA1P29973 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC8.19□□□□□ -1.1
CNGA1P29973 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC8.19□□□□□ -1.1
CNGA1P29973 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC8.19□□□□□ -1.1
CNGA1P29973 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CNGA1P29973 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
CNGA1P29973 AL355375.1-201ENST00000405686 392 ntBASIC8.19□□□□□ -1.1
CNGA1P29973 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
CNGA1P29973 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC8.19□□□□□ -1.1
CNGA1P29973 RPL18AP14-201ENST00000417685 526 ntBASIC8.19□□□□□ -1.1
CNGA1P29973 KIF4CP-201ENST00000422742 1279 ntBASIC8.19□□□□□ -1.1
CNGA1P29973 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC8.19□□□□□ -1.1
CNGA1P29973 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC8.19□□□□□ -1.1
CNGA1P29973 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC8.19□□□□□ -1.1
CNGA1P29973 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC8.19□□□□□ -1.1
CNGA1P29973 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC8.19□□□□□ -1.1
CNGA1P29973 RN7SL569P-201ENST00000494652 288 ntBASIC8.19□□□□□ -1.1
CNGA1P29973 IGLV1-62-201ENST00000518003 441 ntBASIC8.19□□□□□ -1.1
CNGA1P29973 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC8.19□□□□□ -1.1
CNGA1P29973 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC8.19□□□□□ -1.1
CNGA1P29973 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC8.19□□□□□ -1.1
CNGA1P29973 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC8.19□□□□□ -1.1
CNGA1P29973 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CNGA1P29973 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CNGA1P29973 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC8.19□□□□□ -1.1
CNGA1P29973 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC8.19□□□□□ -1.1
CNGA1P29973 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC8.19□□□□□ -1.1
CNGA1P29973 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC8.19□□□□□ -1.1
CNGA1P29973 AL390882.1-201ENST00000618821 594 ntBASIC8.19□□□□□ -1.1
CNGA1P29973 AL161420.1-201ENST00000619393 264 ntBASIC8.19□□□□□ -1.1
CNGA1P29973 AC091544.5-201ENST00000620192 3815 ntBASIC8.19□□□□□ -1.1
CNGA1P29973 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC8.19□□□□□ -1.1
CNGA1P29973 AC022743.1-201ENST00000624990 664 ntBASIC8.19□□□□□ -1.1
CNGA1P29973 AC140479.4-205ENST00000636339 820 ntBASIC8.19□□□□□ -1.1
CNGA1P29973 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CNGA1P29973 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
CNGA1P29973 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CNGA1P29973 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CNGA1P29973 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CNGA1P29973 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
CNGA1P29973 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CNGA1P29973 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC8.19□□□□□ -1.1
CNGA1P29973 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CNGA1P29973 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CNGA1P29973 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CNGA1P29973 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC8.18□□□□□ -1.1
CNGA1P29973 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
CNGA1P29973 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CNGA1P29973 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CNGA1P29973 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
CNGA1P29973 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CNGA1P29973 HCG18-244ENST00000602516 2890 ntBASIC8.18□□□□□ -1.1
CNGA1P29973 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CNGA1P29973 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CNGA1P29973 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CNGA1P29973 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC8.18□□□□□ -1.1
CNGA1P29973 RPL5P8-201ENST00000396820 815 ntBASIC8.18□□□□□ -1.1
CNGA1P29973 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC8.18□□□□□ -1.1
CNGA1P29973 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CNGA1P29973 RNU6-564P-201ENST00000410983 104 ntBASIC8.18□□□□□ -1.1
CNGA1P29973 RPL34P19-201ENST00000415903 342 ntBASIC8.18□□□□□ -1.1
CNGA1P29973 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CNGA1P29973 SNRPEP5-201ENST00000425442 278 ntBASIC8.18□□□□□ -1.1
CNGA1P29973 ANKRD54P1-201ENST00000433115 471 ntBASIC8.18□□□□□ -1.1
CNGA1P29973 Z83313.1-201ENST00000433780 718 ntBASIC8.18□□□□□ -1.1
CNGA1P29973 BX005266.3-201ENST00000443013 1075 ntBASIC8.18□□□□□ -1.1
CNGA1P29973 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC8.18□□□□□ -1.1
CNGA1P29973 IGKV1OR2-2-201ENST00000451163 355 ntBASIC8.18□□□□□ -1.1
CNGA1P29973 RN7SL751P-201ENST00000473281 284 ntBASIC8.18□□□□□ -1.1
CNGA1P29973 RPL5P33-201ENST00000487833 905 ntBASIC8.18□□□□□ -1.1
CNGA1P29973 RN7SL306P-201ENST00000492941 296 ntBASIC8.18□□□□□ -1.1
CNGA1P29973 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC8.18□□□□□ -1.1
CNGA1P29973 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC8.18□□□□□ -1.1
CNGA1P29973 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC8.18□□□□□ -1.1
CNGA1P29973 AC006518.1-201ENST00000541449 943 ntBASIC8.18□□□□□ -1.1
CNGA1P29973 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC8.18□□□□□ -1.1
CNGA1P29973 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC8.18□□□□□ -1.1
CNGA1P29973 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC8.18□□□□□ -1.1
CNGA1P29973 AC092953.2-201ENST00000608000 699 ntBASIC8.18□□□□□ -1.1
CNGA1P29973 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC8.18□□□□□ -1.1
CNGA1P29973 AC087894.3-201ENST00000623682 349 ntBASIC8.18□□□□□ -1.1
CNGA1P29973 AC008555.1-201ENST00000561778 2757 ntBASIC8.18□□□□□ -1.1
CNGA1P29973 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
CNGA1P29973 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CNGA1P29973 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CNGA1P29973 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
CNGA1P29973 WNK1-220ENST00000574564 1401 ntBASIC8.18□□□□□ -1.1
CNGA1P29973 OR51C1P-202ENST00000641159 1444 ntBASIC8.18□□□□□ -1.1
CNGA1P29973 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CNGA1P29973 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CNGA1P29973 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CNGA1P29973 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CNGA1P29973 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC8.18□□□□□ -1.1
CNGA1P29973 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CNGA1P29973 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
CNGA1P29973 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CNGA1P29973 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms