Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MAPK10-377ENST00000642006 2752 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC8.71□□□□□ -1.02
ERCC3P19447 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
ERCC3P19447 AL391380.1-201ENST00000439300 1432 ntBASIC8.71□□□□□ -1.02
ERCC3P19447 MAK-202ENST00000354489 3941 ntTSL 5 BASIC8.71□□□□□ -1.02
ERCC3P19447 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
ERCC3P19447 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
ERCC3P19447 WASF5P-205ENST00000428639 1455 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC8.7□□□□□ -1.02
ERCC3P19447 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
ERCC3P19447 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC8.7□□□□□ -1.02
ERCC3P19447 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC8.7□□□□□ -1.02
ERCC3P19447 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 AL512662.1-201ENST00000624850 2251 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
ERCC3P19447 RNU6-1251P-201ENST00000364502 107 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 LARP1P1-201ENST00000407692 292 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 SNORA2C-201ENST00000408564 137 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 LSM5-206ENST00000409987 504 ntTSL 5 BASIC8.7□□□□□ -1.02
ERCC3P19447 AC024937.2-201ENST00000411669 1242 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 YWHAZP5-201ENST00000419975 730 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC8.7□□□□□ -1.02
ERCC3P19447 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 AL359633.1-201ENST00000421403 310 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC8.7□□□□□ -1.02
ERCC3P19447 OR52S1P-201ENST00000427016 937 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC8.7□□□□□ -1.02
ERCC3P19447 GAS5-211ENST00000432536 959 ntTSL 2 BASIC8.7□□□□□ -1.02
ERCC3P19447 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
ERCC3P19447 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC8.7□□□□□ -1.02
ERCC3P19447 AC140479.1-201ENST00000440423 337 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 RN7SL791P-201ENST00000467868 295 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 RN7SL233P-201ENST00000469988 277 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 AC096743.1-201ENST00000485172 319 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 SUMO2P5-201ENST00000506790 245 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 AC093325.1-201ENST00000508378 326 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC8.7□□□□□ -1.02
ERCC3P19447 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC8.7□□□□□ -1.02
ERCC3P19447 Y_RNA.717-201ENST00000517106 92 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 AP000435.1-201ENST00000528539 496 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC8.7□□□□□ -1.02
ERCC3P19447 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC8.7□□□□□ -1.02
ERCC3P19447 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC8.7□□□□□ -1.02
ERCC3P19447 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC8.7□□□□□ -1.02
ERCC3P19447 AC008507.2-201ENST00000588402 1176 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC8.7□□□□□ -1.02
ERCC3P19447 AC009974.1-201ENST00000608881 455 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 AC015722.2-201ENST00000622210 551 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
ERCC3P19447 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
ERCC3P19447 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC8.7□□□□□ -1.02
ERCC3P19447 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
ERCC3P19447 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC8.7□□□□□ -1.02
ERCC3P19447 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 SF3A3P1-201ENST00000446317 1477 ntBASIC8.7□□□□□ -1.02
ERCC3P19447 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
ERCC3P19447 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC8.7□□□□□ -1.02
ERCC3P19447 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
ERCC3P19447 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
ERCC3P19447 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
ERCC3P19447 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC8.69□□□□□ -1.02
ERCC3P19447 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
ERCC3P19447 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
ERCC3P19447 TRIM51HP-202ENST00000530412 1823 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
ERCC3P19447 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
ERCC3P19447 MIR555-201ENST00000384987 96 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 SNORD65-201ENST00000391079 73 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 ANAPC10P1-201ENST00000395991 556 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 OLA1P1-201ENST00000396387 1189 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
ERCC3P19447 RN7SKP261-201ENST00000410948 278 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 TATDN1P1-201ENST00000414123 891 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC8.69□□□□□ -1.02
ERCC3P19447 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC8.69□□□□□ -1.02
ERCC3P19447 EIF4A1P5-201ENST00000428062 1095 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 HMGB3P5-201ENST00000428894 612 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 AL592114.2-201ENST00000440142 532 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 AL096829.2-201ENST00000446582 742 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
ERCC3P19447 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC8.69□□□□□ -1.02
ERCC3P19447 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC8.69□□□□□ -1.02
ERCC3P19447 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms