Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 VN1R66P-201ENST00000412929 916 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 EIF4A1P13-201ENST00000415667 230 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 ATP5LP4-201ENST00000434169 307 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 SDHCP3-201ENST00000445371 506 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 RPS14P8-201ENST00000478778 369 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 RPS10P20-201ENST00000494130 463 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 TECRP2-201ENST00000503270 928 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AC111000.1-201ENST00000514545 713 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 GLYATL1P4-201ENST00000529326 906 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 NDUFA3P2-201ENST00000531434 232 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 OR7E161P-201ENST00000533722 967 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AC126177.6-201ENST00000550420 1009 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AC090971.3-201ENST00000557871 1041 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AC024614.1-201ENST00000577546 307 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 MIR4685-201ENST00000578185 69 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 EXOSC3P2-201ENST00000594464 497 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AC005070.2-201ENST00000604391 260 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AL139254.2-202ENST00000641937 1156 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AL121949.2-201ENST00000403446 1548 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AP002833.3-201ENST00000625075 2265 ntBASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DRB4X5D2U9 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 AC013268.3-201ENST00000262716 2324 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 AC020978.6-201ENST00000571197 3177 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 AC023886.2-201ENST00000321285 411 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 RNU4-81P-201ENST00000363561 144 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 RNA5SP512-201ENST00000364550 120 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 RNA5SP172-201ENST00000365061 118 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 SLC25A5P7-201ENST00000406156 896 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 RNA5SP177-201ENST00000410122 107 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 RPL12P10-201ENST00000413498 498 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 VDAC1P10-201ENST00000416715 891 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 CLIC4P3-201ENST00000422221 752 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 ANXA2P2-201ENST00000435128 1020 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 RPL21P33-201ENST00000444831 484 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 AC026826.1-201ENST00000493002 361 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 NACAP6-201ENST00000509572 622 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 AC096708.2-201ENST00000577676 512 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 MIR1273F-201ENST00000580581 99 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 AC010463.3-201ENST00000594077 500 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 AC063962.1-201ENST00000608199 521 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms