Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 RNA5SP442-201ENST00000365050 107 ntBASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 RBBP4P4-201ENST00000398588 1289 ntBASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 MRPL32P1-201ENST00000406301 247 ntBASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 RN7SKP254-201ENST00000410685 310 ntBASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 GTF3AP1-201ENST00000416942 1004 ntBASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AL590762.3-201ENST00000436372 640 ntBASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 TREML3P-201ENST00000457327 501 ntBASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AL139824.2-201ENST00000458731 1095 ntBASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AC126615.1-201ENST00000470084 630 ntBASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 RPL22-208ENST00000497965 786 ntTSL 2 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AL135933.1-201ENST00000498657 802 ntBASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AC093801.2-201ENST00000503966 1050 ntBASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AC146944.3-201ENST00000509969 371 ntBASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AC114940.1-201ENST00000512162 1265 ntBASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AC022826.1-201ENST00000519383 805 ntBASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AC023389.2-201ENST00000580031 955 ntBASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 MIR3159-201ENST00000584572 74 ntBASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AC096947.1-201ENST00000603233 470 ntBASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AC245407.2-201ENST00000614199 451 ntBASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AL445523.1-201ENST00000451184 1362 ntBASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.44□□□□□ -1.22
CDK5RAP1Q96SZ6 SAMMSON-222ENST00000641901 2727 ntBASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP1Q96SZ6 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms